Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0465 ATGGCTTCTTATTCATACCAATACCACCCTTTTCTTGTTGAATCATTACCATTTTTCTCCAATAATATAAACACTATCTCTCCTCATTTCAACCTTCATCATCAAACCTCTTTTGATGTCACAAATCAGGATAATAGCTGTGATGATCAAAGTTCCAAGATCACCATTAGTGACAATGAACCTTCTATTGCCAAAAACATTAGCCCTCAGTCTTCTATGGTAGTGGACAAGCTTGAAATTGGTGAACAGGTAACTCAGAAGGTGACTCCTATGGTTAAGAAGAGGAGAACCAGAAGTGCATATTCCTTGTATAAGCCTCAATCAAAGGATGTAAAAGAAGGGAAAAACAAGAGGCAGAGGAATAACAACAATGGTGAGGTGAAAAGAGTGGAGAAGCCAAAAGCAGAAAAGAAAGATCAGAAAAAAAGTTCTGAAGTGCCCCCAAAGGGCTATATCCATGTCAGAGCAAGAAGGGGTCAGGCAACTGATAACCACAGCCTTGCTGAAAGGGTTAGAAGAGAGAAAATAAGTGAAAGGATGAAGATGTTGCAAAGACTTGTGCCAGGGTGTGATAAGGTGACTGGAAAGGCCCTTATGTTGGATGAAATAATCAATTATGTCCAATCTTTACAAAATCAAGTTGAGTTTTTGTCATTGAAACTTGCTTCAGCAAACCCCATGGTCTATGACTTAGCAATGGACTCAGACACCATCTTGGTTAGACCAGAGAAATTAAATAGCATTGCATCACTATCCATGCAACAATTCAACAGCACCAATCAAGTCATAACCACCATGACCCCCACAAGCATTTTTCCCACTCCTACTAATGACTATCTTTTGGACAATTCAGCTTCAACTTTTTTTCATGGGCAGACGCCAAATATCTTCTCTGAGGATTTAGCTTTTACATTAGATAAGGAATTCTAG 930 0.3903 MASYSYQYHPFLVESLPFFSNNINTISPHFNLHHQTSFDVTNQDNSCDDQSSKITISDNEPSIAKNISPQSSMVVDKLEIGEQVTQKVTPMVKKRRTRSAYSLYKPQSKDVKEGKNKRQRNNNNGEVKRVEKPKAEKKDQKKSSEVPPKGYIHVRARRGQATDNHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSLKLASANPMVYDLAMDSDTILVRPEKLNSIASLSMQQFNSTNQVITTMTPTSIFPTPTNDYLLDNSASTFFHGQTPNIFSEDLAFTLDKEF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0465 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 210 IPR011598 GO:0046983
Lan15g0465 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 227 IPR036638 GO:0046983
Lan15g0465 309 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 300 IPR024097 GO:0006355
Lan15g0465 309 CDD bHLH_AtBPE_like 150 236 - -
Lan15g0465 309 SMART finulus 166 216 IPR011598 GO:0046983
Lan15g0465 309 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 300 - -
Lan15g0465 309 MobiDBLite consensus disorder prediction 89 164 - -
Lan15g0465 309 Pfam Helix-loop-helix DNA-binding domain 164 211 IPR011598 GO:0046983
Lan15g0465 309 Gene3D - 157 230 IPR036638 GO:0046983
Lan15g0465 309 MobiDBLite consensus disorder prediction 43 70 - -
Lan15g0465 309 MobiDBLite consensus disorder prediction 108 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0465 Lan-Chr15 10779651 10782802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0465 115 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 57.895 3.94e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan15g0465 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0465 - - gmx:100806696 378.637