Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0456 TTTTTGAACTGTGCAATATTTGGCAACGCAACTGATTTATTCTCTCATACAATGCCTCGGTCAGCAACCAGAGCAGCAATGCTGGTGAGGGTTAATACCCTTCTTCAAGGGTACTCAGGCATAAGATTTGAAATCTTAGAAGCAATCACCAAACTCCTCAACCACAATGTGACCCCCATCTTGCCATTACGTGGTACAATTACTGCTTCTGGTGATCTAATCCCACTCTCCTACATTGCTGCATTGCTAATAGGTAGGCAAAACTCCAAAGCTGTTGGACCATCTGGAGAGACCCTCAATGCCGACGAAGCATTCCATTTAGCAGGTCTGCATGCAGGGTTTTTTGAGTTGCAGCCCAAAGAAGGTCTTGCCCTCGTAAATGGAACCGCTGTTGGGTCCGGTGTAGCTTCTATGGTCCTTTTTGAGGCAAACATATTAGCTTTATTGTCAGAAGTGCTATCAGCAGTTTTTGCAGAAGTTATGCAGGGGAACCCAGAATTTACGCACCACCTGATACACAAGCTTAAGTACCATCCTGGTCAAATTGAAGCTGCAGCTATTATGGAACACATTTTAGATGGAAGCTCTTATATCAGAAAAGCAAAATTGCAACAACCAGATCCATTGCAGAAGCCTAGAAAGGATCGCTATGCTCTTCAAACTTCTCCTCAGTGGCTTGGCCCGCAGATTGAGGTCATAAGGTATTCAACAAAATCAATTGAAAGGGAGATAAACTCGGTGAATGACAATCCTTTGATTGATGTGACTGGGAATAAGGCCTTGAATGGGGGAAATTTCCAAGGCACCCCAATTGGAGTTTCAATGGATAACACACGGTTAGCTATTGCTTCAATTGGCAAAATCATATTTGCCCAATTCACTGAGCTGGTGAATGACTTGTATAACAATGGGTTGCCATCAAACCTCTCTGCTGGTAGAAATCCAAGTTTGGATTATGGTTTTAAGGCATCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATCTAGCAAATCCGGTAACAAGTCACGTGCAAAGTGCTGAGCAGCACAACCAAGACGTGAACTCTTTGGGTTTAATTTCTGCTTGGAAAACTGCTGAAGCGGTTGAGATATTGAAGCTCATGTCCTCTACTTATTTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATATTTAAGAACACAGTCAAGAATACTGTAAGCAGAGTTGCCAAGAAGACATTAACCACAGAAGACAATGAAGAAATCAACCCATTTCGGTTTTGTGAGAAAGAATTGCTCCAAGTGGTTGATAGAGAATATGTATTCTCCTACATTGATGATCCTTTCAATGTTGCTTACCCATTGATGCCAAAACTAAAGCAAGTACTTTATGAGCAAGCACACATCAGTGCCATTAATGAGAAGAATGTGAGCTTGTTAATTTTTGAGAAGATTAGAGATTTTGAGGATGAAATAAAGTCTCTCTTGGCGAAGGAAATTGAAAGTGCAAGAGTGGATTATGAGAATGGCAATCCAGCAATTCCAAACAGAATTAAGGAATGTAGGTCATATCCACTATATAAGTTTGTGAGGGAGGAATTAGGATCAGGGTTGCTAACTGGAGAAAAGACTGTCTCACCAGATCAGGAATTTGAAAAAGTATTTTCTGCAATATGTCAAGCAAAGATTATTGACCCTATTCTGGAATGCCTCAGAGAATGGAATGGAGTTCCCATTCTATAA 1743 0.4119 FLNCAIFGNATDLFSHTMPRSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIAALLIGRQNSKAVGPSGETLNADEAFHLAGLHAGFFELQPKEGLALVNGTAVGSGVASMVLFEANILALLSEVLSAVFAEVMQGNPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYIRKAKLQQPDPLQKPRKDRYALQTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVTGNKALNGGNFQGTPIGVSMDNTRLAIASIGKIIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISAWKTAEAVEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVAKKTLTTEDNEEINPFRFCEKELLQVVDREYVFSYIDDPFNVAYPLMPKLKQVLYEQAHISAINEKNVSLLIFEKIRDFEDEIKSLLAKEIESARVDYENGNPAIPNRIKECRSYPLYKFVREELGSGLLTGEKTVSPDQEFEKVFSAICQAKIIDPILECLREWNGVPIL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0456 580 Gene3D - 1 129 IPR024083 -
Lan15g0456 580 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 65 81 IPR022313 GO:0016841
Lan15g0456 580 SUPERFAMILY L-aspartase-like 2 578 IPR008948 GO:0003824
Lan15g0456 580 PANTHER HISTIDINE AMMONIA-LYASE 1 579 IPR001106 -
Lan15g0456 580 Gene3D - 395 516 IPR023144 -
Lan15g0456 580 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 1 571 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lan15g0456 580 Gene3D Fumarase/aspartase (Central domain) 130 576 - -
Lan15g0456 580 CDD PAL-HAL 17 392 IPR001106 -
Lan15g0456 580 Pfam Aromatic amino acid lyase 16 395 IPR001106 -
Lan15g0456 580 PANTHER PHENYLALANINE AMMONIA-LYASE 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0456 Lan-Chr15 10549377 10551206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0456 1 579 Monolignol Biosynthesis Gene Families AT2G37040 75.000 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0456 K10775 - gmx:100787872 1027.7