Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0443 ATGGTTTCAACGAGACGCAACACTGGATCTCTCTCTTCCAACAACACTAAACGACCTTCTTCTTCCGACGACAATAACAAGCCTCCTTCTTCCCCTTCTTCTAAACGACACAAGGTTGATAATGGCGGCGACGCGTCAGAGAAACCGGCGCCGGCAGCGGAGAATTCCAAGGATTTGAGAACTCTTGAACCTCCTGCCGATCCCGGAGAATGCGGTACCGGTGATACTCAGATCTCTGAAGCTGGCGGTGCTGATGGTAAATGCGACGCTGCGCCTGCGGTGGCTGTGGCAGCTCCGATTGCTGAAGGTTCTTCGCCAACAACTTTGGTGGCTGAGAAACAAAGGGCTTCTTTCTCTTCATGGGGCATATATCAGAAGCAGAATCAAAAAACTGATTGTTCAGTTCCCTGGTGCAGGCTATTGACTCAGTCTTCACAGAATCCAAATGTTGTCATTTGCACACCGAATTTCACGATCGGTTCGAGTAGAAATTGCAATTTTCCATTGAAGGATCAGACTATAAGTGGAAATTTATGCAAGATCAAGTATACTGAGCGTGAGGGAAATGCTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCTTGTCAAGAAGAACACCAGCTCTGTGCTTAATTCCGGCGATGAGGTGGTTTTTGGGTTGCTGGGAAATCATTCTTATATTTTTCAGCAACTAAATATCGAAGGCACAGTTAAGGGTGCAGACATTCAGAATGGTGTTGGGAAATTTGTGCAGATTGAAAGGAGAAATAGAGACTCTTCAGCTGTGGCAGGGGCTTCCATCTTGGCTTCTCTTTCTAGCCTCAAACATGATCTTACAAAATTGAAGTCTCCATCTCAGACTGCCAATAAACCTCACCATGTTACTGATGTTTCTGGTCATTCTGTTCTCCGTGATGGTACAGAATCTGAGCTTGATGGTCTTGAAAGCAACTCAGCTCCAAATGTGGGGACGGATAAGGCTTCTGATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATCCAGATGATACAGGCACAGAAGCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTCCTAGGGCCTTTCTTCAGGATCCTTGCTGGATCTAATTGTAAACTGAAATTGAGCAAAAATATCTGTAAACAGGTATTGGAAGAAAGAAATGGGACGAGGGATACACTAGCTGCATCGACTTCGGGTACGTCTGTGCGCTGTGCAGTTTTTAAAGAAAATGTTGAAGCTGCAGTTCTGGATGGAAAAGAAATAGACATGTCCTTTGACAGCTTCCCATACTTTTTAAGTGAGAATACAAAAAATGTCCTTGTTGCAGCATGCTTTATACACCTGAAGCATAAAGAACATGCAAAGTATACCGCAGATCTTACAACCATAAACCCTCGTATCCTACTCTCAGGACCTGCAGGATCAGAAATATACCAGGAGATGTTGGCAAAAGCACTGGCAAATTACTTTGGTGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGCAGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTCCACATGGTCTCGAGTCCCAACCTAAGTTAGAAATTGATAGTGTAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAAATATAGCTGCTCATCTTCTGGTACCTTGTATCAGACATCTTCTTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAATCCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAACGTCACTGATCTTCGCTTGGAAAATGGTGGCATTGATGAACTGGACAAATTACTTATCAATACATTGTTCGAGGTTGTGTTTACTGAAAGCAGAACTGAACCTCTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCATATTCATTTAGAAGTAAGCTTGAAAAGCTTCCAGACAATGTGGTGGTCATAGGTTCACACACTCATAATGACAGTCGGAAGGAGAAGTCACATCCTGGGGGTTTGCTTTTTACGAAGTTCGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCTGATGGTTTTGGAAGATTGCATGAAAGGGGAAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTTCCAAATAAAGTAACAATTCACATGCCACAGGATGAGGGGCTTTTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTCAAAATCAAAGCAAATTTGCACCATTTGCGCACGGTTTTAAGCCGTTGCGGGATGGAATGTGAAGGACTTGAGACCTTGTGCATCAAGGATCAGACACTTACAAATGAAATTGTAGAGAAGATTGTTGGTTGGGCTTTGAGCCACCACCTAATGCAAAATTCTGAAGCTGATCCTGAAGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATTTTACAGGCTATCCAGAATGAGTCAAAGAGCCTGAAGAAGTCGCTTAAGGATGTTGTAACAGAGAACGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAATGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACAATGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCCGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGTATCCTACTATTTGGTCCTCCTGGAACAGGTAAGACAATGCTTGCGAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGCATTACGTCTAAGTGGTTTGGCGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCGAGTAAAATTGCTCCTAGTGTTATATTTGTTGACGAAGTTGACAGCATGTTGGGCCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGATTACGTACAAAAGAAACTGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCCTATGACCTAGACGAGGCTGTCATACGGAGGCTGCCTCGGAGATTAATGGTAAACTTGCCTGATCCTCCAAACAGAGCAAAAATATTAAAAGTCATACTAGCTAAAGAGGACTTGTCTTCTGATGTTGATCTGGAGGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAAATATTAGAAAAAGAAAAGAAGGAACATGCTGCTGCTCTAGCCGAAGGAAGACCAGCTCCAGCATTAAGTGGAAGTGCAGATATCCGATCCTTGAACATGGAAGACTTTAGACATGCTCATCAACAGGTATGTGCAAGTGTTTCATCCGAATCCGTGAATATGACCGAGCTTTTACAATGGAATGAACTATATGGCGAAGGTGGTTCAAGAAGAAAAAGCTCACTCAGCTATTTCATGTGA 3741 0.4341 MVSTRRNTGSLSSNNTKRPSSSDDNNKPPSSPSSKRHKVDNGGDASEKPAPAAENSKDLRTLEPPADPGECGTGDTQISEAGGADGKCDAAPAVAVAAPIAEGSSPTTLVAEKQRASFSSWGIYQKQNQKTDCSVPWCRLLTQSSQNPNVVICTPNFTIGSSRNCNFPLKDQTISGNLCKIKYTEREGNAVAVLESTGSKGSVLVNGTLVKKNTSSVLNSGDEVVFGLLGNHSYIFQQLNIEGTVKGADIQNGVGKFVQIERRNRDSSAVAGASILASLSSLKHDLTKLKSPSQTANKPHHVTDVSGHSVLRDGTESELDGLESNSAPNVGTDKASDVGASDKNSPLDCDPDDTGTEAGNVKLSGVNDFLGPFFRILAGSNCKLKLSKNICKQVLEERNGTRDTLAASTSGTSVRCAVFKENVEAAVLDGKEIDMSFDSFPYFLSENTKNVLVAACFIHLKHKEHAKYTADLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKDGSHADKSCSSAKQSPTATDMARSMDPSTSDTDTPSSSNTPTPHGLESQPKLEIDSVASTSGTAKNCLFKLGDKVKYSCSSSGTLYQTSSSRGPTNGSRGKVVLVFEENPLSKVGVRFDKPVPDGVDLGGACEGGQGFFCNVTDLRLENGGIDELDKLLINTLFEVVFTESRTEPLILFMKDAEKSIVGNGDPYSFRSKLEKLPDNVVVIGSHTHNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDGFGRLHERGKEVPKPNKTLTKLFPNKVTIHMPQDEGLLASWKQQLDRDVETLKIKANLHHLRTVLSRCGMECEGLETLCIKDQTLTNEIVEKIVGWALSHHLMQNSEADPEAKLVLSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTMKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPYDLDEAVIRRLPRRLMVNLPDPPNRAKILKVILAKEDLSSDVDLEAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSADIRSLNMEDFRHAHQQVCASVSSESVNMTELLQWNELYGEGGSRRKSSLSYFM* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0443 1246 Pfam AAA+ lid domain 1135 1173 IPR041569 -
Lan15g0443 1246 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 392 1246 - -
Lan15g0443 1246 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 81 368 - -
Lan15g0443 1246 Coils Coil 902 922 - -
Lan15g0443 1246 Pfam ATPase family associated with various cellular activities (AAA) 982 1111 IPR003959 GO:0005524|GO:0016887
Lan15g0443 1246 MobiDBLite consensus disorder prediction 289 356 - -
Lan15g0443 1246 SUPERFAMILY SMAD/FHA domain 135 234 IPR008984 GO:0005515
Lan15g0443 1246 SMART AAA_5 978 1115 IPR003593 -
Lan15g0443 1246 CDD AAA 980 1113 - -
Lan15g0443 1246 Gene3D - 1114 1208 - -
Lan15g0443 1246 ProSiteProfiles Forkhead-associated (FHA) domain profile. 157 210 IPR000253 GO:0005515
Lan15g0443 1246 MobiDBLite consensus disorder prediction 530 577 - -
Lan15g0443 1246 CDD FHA 137 237 IPR000253 GO:0005515
Lan15g0443 1246 MobiDBLite consensus disorder prediction 305 319 - -
Lan15g0443 1246 MobiDBLite consensus disorder prediction 535 573 - -
Lan15g0443 1246 MobiDBLite consensus disorder prediction 1 86 - -
Lan15g0443 1246 ProSitePatterns AAA-protein family signature. 1085 1104 IPR003960 GO:0005524|GO:0016887
Lan15g0443 1246 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 81 368 - -
Lan15g0443 1246 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 392 1246 - -
Lan15g0443 1246 Gene3D - 136 245 - -
Lan15g0443 1246 MobiDBLite consensus disorder prediction 30 44 - -
Lan15g0443 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 941 1221 IPR027417 -
Lan15g0443 1246 Gene3D - 940 1221 IPR027417 -
Lan15g0443 1246 MobiDBLite consensus disorder prediction 1 29 - -
Lan15g0443 1246 Pfam FHA domain 158 227 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0443 Lan-Chr15 10239508 10256627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0443 941 1193 Calmodulin-binding Proteins AT3G56690 40.385 7.45e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0443 - - gmx:100780098 1982.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0443 15 10239508 10256627 Lan14g0349 14 7239387 7243651 LSH
Lan12g0777 12 15011886 15021957 Lan15g0443 15 10239508 10256627 PCT
Lan1g1931 1 34566803 34578418 Lan15g0443 15 10239508 10256627 PCT
Lan15g0443 15 10239508 10256627 Lan12g0777 12 15011886 15021957 PCT
Lan15g0443 15 10239508 10256627 Lan1g1931 1 34566803 34578418 PCT