Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0440 ATGGTTGCTGCCGGCGATACTTCAACGGAGGTGGGTGTAGCACGTGAATTGCACGTGCTTGCCGTAGATGATAGCCATGTTGATCGTAAGGTCATTGAACGTTTGCTCAAAATCTCTTCTTGCAAAGTGACAGTGGTAGAGAGTGGAACCAGGGCTCTTCAATATTTAGGGTTGGATGGAGAGAACAGCTCCATTGATTTTGATAGTTTGAAGGTTAATCTGATAATGACCGATTATTCCATGCCTGAGATGACCGGGTATGAACTACTCAAGAAGATTAAGGAGTCCTCTGTTTTTAGAGAGATTCCAGTGGTGGTTATGTCATCTGAGAATATTTTGACCAGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGATTTTTTGTTGAAGCCCGTGAAGTTGTCCGATGTAAAACGCTTAACAGATTTCATGAGAGGTGAAGGGAAGATAGGAGAAAAACGATCTCCGAAAAGAAGGCAATCAGATAATTGCACTCCATCTCTATCAACTGTGTTCTCACTGACTTCTTATCGTCGCGATATAGCATCACCGGAACTACTTCCATTGTCACCATCTGCATCGCCTTCCAAGAAATCTCGAGTGTGCAAAAAGATTGAGCTGTGCTAA 627 0.4322 MVAAGDTSTEVGVARELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGENSSIDFDSLKVNLIMTDYSMPEMTGYELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKLSDVKRLTDFMRGEGKIGEKRSPKRRQSDNCTPSLSTVFSLTSYRRDIASPELLPLSPSASPSKKSRVCKKIELC* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0440 208 SUPERFAMILY CheY-like 16 141 IPR011006 -
Lan15g0440 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 200 IPR045279 GO:0009736
Lan15g0440 208 Gene3D - 17 182 - -
Lan15g0440 208 Pfam Response regulator receiver domain 19 138 IPR001789 GO:0000160
Lan15g0440 208 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Lan15g0440 208 MobiDBLite consensus disorder prediction 148 167 - -
Lan15g0440 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 14 200 - -
Lan15g0440 208 SMART REC_2 17 141 IPR001789 GO:0000160
Lan15g0440 208 CDD REC_typeA_ARR 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0440 Lan-Chr15 10169045 10172488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0440 6 166 Response Regulator Gene Family AT5G62920 69.325 1.88e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan15g0440 Response_reg 3.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0440 K14492 - gmx:100819165 282.337