Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0424 ATGGCCACCGTTACAACACAGGCTTCTGCTGCCATTTTCCGACCATGTGCTTCTAAATCTAGGTTTCTCAGTAGCTCTTCTGGTAAACTCAATAGGGAAGTAGCTTTTAGACCAGTGGGATCTACTCCTTCTACCTCTTTCAAGGTTGAAGCCAAGAAAGGAGAGTGGCTACCAGGACTAGCCTCCCCTGGTTACCTCAACGGCAGTCTTCCTGGTGACAATGGGTTTGATCCTCTGGGTCTTGCTGAGGACCCTGAGAACTTGAGGTGGTTTGTTCAAGCTGAGCTTGTGAATGGACGTTGGGCCATGTTGGGTGTTGCAGGCATGTTGCTTCCAGAGGTCTTTACCAACATTGGAATCATTAATGCCCCTAAGTGGTATGATGCAGGGAAAGAAGAATACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATTTTGTTCCATTATGTGGAAATCAGAAGATGGCAGGACATTAAAAACCCTGGAAGTGTTAACCAAGATCCCATCTTTAAGCAATACAGCTTGCCCCCAAATGAAGTTGGCTACCCTGGTGGCATTTTCAACCCCTTGAACTTTGCACCAACTGAGGAGGCCAAAGAGAAGGAAATTGCAAATGGGAGATTGGCAATGTTAGCATTCTTAGCATTTATAATTCAGCACAATGTGACAGGCAAAGGACCTTTTGACAACCTCCTCCAGCATCTCTCTGACCCATGGCACAACACCATTGTCCAAACACTGAGTGGCAACTAA 759 0.4598 MATVTTQASAAIFRPCASKSRFLSSSSGKLNREVAFRPVGSTPSTSFKVEAKKGEWLPGLASPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINAPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTEEAKEKEIANGRLAMLAFLAFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSGN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0424 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Lan15g0424 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Lan15g0424 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Lan15g0424 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Lan15g0424 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0424 Lan-Chr15 9442574 9444088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0424 38 250 Chloroplast and Mitochondria Gene Families AT3G61470 51.802 2.60e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0424 K08910 - rcu:8263414 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0424 15 9442574 9444088 Lan3g0670 3 10924208 10926401 LSH