Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0422 ATGGAAAATGTTTCAATGGTTTGCAAAGAAGAGGGTAGGATGGATTTGCCTCCAGGGTTTAGGTTTCAACCAACTGATGAAGAGCTTATAAGTCATTACCTTTACAAGAAAGTAACTGATACCAACTTTTCAGCTAGGGCCATTGGAGATGTGGACTTGAACAGGTCTGAGCCTTGGGATTTGCCATGGAAAGCAAAGATGGGAGAGAAAGAGTGGTACTTCTTCTGTTTGAGAGACAGAAAATACCCAACTGGTTTGAGGACAAACAGGGCTACCGAAGCAGGATACTGGAAGGCTACAGGGAAAGATAGGGAGATTTACATAGGAAAATATCTGGTTGGAATGAAAAAAACTCTGGTTTTCCACAAAGGAAGGGCACCAAAAGGAGAGAAGTCTAACTGGGTTATGCATGAGTATAGACTTGAGGGTAAATTCCATGTTCACAATCTCCCGAAAACTGCAAAGAATGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCATCTGGAAAGAAAACCCATATTTCAGGGATAATGAGGCTGGAATCTTTGGCAAATGAATTGGGTTCTTCTGGTCTACCACCATTGACAGATTCTTCAGCTTCTCCTATTGGCAACACTAAAGCACCACTGTGTATTACTGAATTGTCTTACGTGCCCTGCTTCTCCACTACAAATGAGGATCAAAGAAACCATCTAGGAGGGATCTTTGATAATTCATTCACCTACAACTCCCTTTTTGGGACTTCTTCAAATCCTTCAAACATTCCTTTTGGTTCATTATACTCAACTACTAAAGGGGTTCAACTTCAAGATCAACCAAATTTGCCATTACCTTGTTCTGTTTATAGCTTCCAGGACCAAACAAACATTAGTTCCTTACTTGATAATAACCATGCATCAAACTTCAGCAATAGTTTCAAATCAGAGAGGGGAATGGCTACTGTCTCACAAGGAACAAGTCTAATTACTGATGTGAACCATGAAATCTTTTCGGTTATATCAAATTTCGGTATGGTTAGAAAGCCCTATGATATTCAGCAACACCCTCCTGCTACTTCAGCTGCACCACCATTAAACCACCTTACTACTTTGTGGAATTACTGA 1107 0.4056 MENVSMVCKEEGRMDLPPGFRFQPTDEELISHYLYKKVTDTNFSARAIGDVDLNRSEPWDLPWKAKMGEKEWYFFCLRDRKYPTGLRTNRATEAGYWKATGKDREIYIGKYLVGMKKTLVFHKGRAPKGEKSNWVMHEYRLEGKFHVHNLPKTAKNEWVICRVFQKSSSGKKTHISGIMRLESLANELGSSGLPPLTDSSASPIGNTKAPLCITELSYVPCFSTTNEDQRNHLGGIFDNSFTYNSLFGTSSNPSNIPFGSLYSTTKGVQLQDQPNLPLPCSVYSFQDQTNISSLLDNNHASNFSNSFKSERGMATVSQGTSLITDVNHEIFSVISNFGMVRKPYDIQQHPPATSAAPPLNHLTTLWNY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0422 368 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Lan15g0422 368 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Lan15g0422 368 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Lan15g0422 368 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 5 354 - -
Lan15g0422 368 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 354 - -
Lan15g0422 368 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0422 Lan-Chr15 9302577 9304532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0422 14 368 NAC Transcription Factor Family AT5G07680 52.676 1.62e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan15g0422 NAM 6.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0422 - - lja:Lj0g3v0155359.1 490.73