Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0421 ATGGGAAGAACTCCTTGCTGCAATCACGAGGAAATGAAAAAGGGTGCATGGACAGTTGAAGAAGACCAGAAACTCATAACTTACATTCAGACACATGGCACAGGAAGCTGGCGTACCATGCCACAGAAAGCTGGTCTTCAAAGATGTGGAAAAAGTTGCAGGCTGAGATGGTTTAACTACCTCAGACCTGACATTAAAAGAGGACATTTAAGCGAAGAAGAAGAACAAACCATTATAAGACTCCATGCTGCTCTTGGCAACAGGTGGTCAAGTATTGCCAAGCATTTGCCAATGCGGACAGACAATGAAATCAAGAACTACTGGAACTCATATTTGAAAAAGCAGTTGGATATTAAAGGTGTTGATCCATTTAGTACCAAACCAATTACCACGGTTAGTTCTTCATCAGATTCAGAACCTAACACAAATGAGGTAAGCGAATTCATGATCACCCACCCTCACTCTTTAAGCTCATCAAAATCAGAGTCATCTCAGCTACTGAACAAAGTTGCTAAAAAGATTGTTGGGTCTGGTTACCTTGATGCTGTAAAATCTTTGCAACTTGTTGCTGATAATACCATTAATGATGATTTTGTCACAAAAATTGAATTCGAGTCTAGAAGGGACAATACTATTAAGCAGTCTCATGTGCCTAATTTTAGCTCCATTTCAAGTCATTCTTCAACTTCTGCTCAATTACTGAACAAAATGGCTACTTCTCTTTCTAAAAAAACTCATGGCCATGAAGCTGCAAAAGCAATATTTTCAAAAATAATGGAAGGTGATGAGAAAAGTGAGGCTAGCGCTGATGGTAGTGCCAATAATAATGCTCTGAACCTTTTTGAGGATGAACCAAAGATAACAAGAATAATTGACTCTCCTTCTAGTCCTACCGTAACATTTAATGAAGTACTCTCACACTCATGCTTTCTAGATAATTGGCAATGTTTTTCATCTAATTATATATCTTTTGGAAATTGTGCTGCAAGTGGTGATGATAGCAGTGTATCTGGAGTAAACTTGAGAAGTAGTAGCAGCTTTTGCATTGAATCTCCTAATTATTCTACGTTGTGCTTCTTAGATGAGAATGCACCAGCAGCTTCAGCTGCTGATAAATCAGATGATTACTTGAATGAAATTTTAACGTGTGAGGATGAAATAAGCAAGTACATTCAGTATTTGTAA 1185 0.3789 MGRTPCCNHEEMKKGAWTVEEDQKLITYIQTHGTGSWRTMPQKAGLQRCGKSCRLRWFNYLRPDIKRGHLSEEEEQTIIRLHAALGNRWSSIAKHLPMRTDNEIKNYWNSYLKKQLDIKGVDPFSTKPITTVSSSSDSEPNTNEVSEFMITHPHSLSSSKSESSQLLNKVAKKIVGSGYLDAVKSLQLVADNTINDDFVTKIEFESRRDNTIKQSHVPNFSSISSHSSTSAQLLNKMATSLSKKTHGHEAAKAIFSKIMEGDEKSEASADGSANNNALNLFEDEPKITRIIDSPSSPTVTFNEVLSHSCFLDNWQCFSSNYISFGNCAASGDDSSVSGVNLRSSSSFCIESPNYSTLCFLDENAPAASAADKSDDYLNEILTCEDEISKYIQYL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0421 394 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan15g0421 394 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lan15g0421 394 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 262 - -
Lan15g0421 394 Gene3D - 70 144 - -
Lan15g0421 394 CDD SANT 16 61 IPR001005 -
Lan15g0421 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan15g0421 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan15g0421 394 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan15g0421 394 SMART sant 66 114 IPR001005 -
Lan15g0421 394 SMART sant 13 63 IPR001005 -
Lan15g0421 394 PANTHER TRANSCRIPTION FACTOR MYB51 1 262 - -
Lan15g0421 394 CDD SANT 71 112 IPR001005 -
Lan15g0421 394 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan15g0421 394 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Lan15g0421 394 Gene3D - 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0421 Lan-Chr15 9035457 9037873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0421 1 215 MYB Transcription Factor Family AT5G07690 48.560 1.78e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan15g0421 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0421 K09422 - gmx:100775267 428.713