Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0415 ATGGATCCTGAGGAGGTTAATTTGAACAGAGAAAGTGGAAAAAATAGTGATGGATTCGTTGATAGAAGTAAAGTACGGATTTTATTGTGTGATAACGATTCCAAGAGTTCTCAAGAGGTTTTTACTCTTCTTCTCGGATGCTCTTATCAGGTTACTTCCGTAAGGTCAGCCAGGCAGGTAATTGATGCACTGAATGCAGAGGGGCAACATATAGATATCATACTTGCTGAACTTGACCTTCCAATGAAGAAAGGTATGAAGATGTTAAAGTACATAGCACGGGACAAAGAATTGCGCAGAATTCCTGTCATAATGATGTCCGCCCAAGATGAGGTATCCACTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTGCGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTATGACTTTGATCTGGTTGCGTCAGACCCTAGTGATGCCAATACAAACAGTACGACCTTGTTTTCTGATGACACAGATGACAAGTCCAAGAGAAGCACTAATCCAGAGACTGGAATGTCAACCCAACAAGAGCTAGAGTCTAATATTGCCATTGCTGCTGCTGTTGTTGAGGAGCCACCCAATGCTCATGCATCAGAGTGTCGGCCTGATGTACCCAGAATCAGTGATCTCCGAACAGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTAAGGATTGGGGAGTCATCAGCCTTCTTCACTTATGTTAAAGCATCCGTGTCAAAGAGCAACTTCGAAGGAATTGTTCATGTTGACAACAATGCTGCTATACGCATGCGGGTGGAAGATGCACATCAATCATGTGCTCAACACCGGGTTAATGGCCTTCAAACACATGCAAATGGAGAGACATGTGAAAGTCAATCGCAAGATGACTTTCCCAGCAGCAATAGTTTTCCTGATTCTTTCTCTATAGAGAGGTCTTGTACTCCACCTGCGTCTATGGATGTTTCACCACAAAATCACCCCAAGGAAGAAAATCTGCCTCCAGGTACGGTGCATCCAAGAAATGGAACTCATGGTTCTGAGCTTGATGTTTCTACCATGGCTACCCAACATGCTTATCCATATTATATGTCTGGAGGTTTTAATCATGTTATGATGTCTTCATCAGCACAAATGTATCAAAAGAATATCCAGGACATGCAGAATCATGCTTGTTCAGCTATGATTGCTCAATATAATCATCTTCCCCAAGTTCCTCCGCATGCAATGGGAATGACTTCCTACCCATATTACCCAATGAGTCCATACTTACAACCTGGTCAGATTCCGACATCTCATCCATGGCCATCATTTGGAGGTTCAAGTTCATCTGAAGTAAAATTAAGTATAGGTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGGAAAGAGCGTTGCTTTGATAAGAAAATCAGATACGTTAATCGAAAACGACTTGCTGAGCGCCGGCCTCGTGTGAAGGGACAGTTTGTCAGAAAGTTAAATGGTGCTAATGTGGATCTTAATGGACAACCTGCTTCCATTGACTATGATGAAAATCTTGACGAGGAAGATGACCAGGGAGCACGAGATTCCTCTCCCGAGGACGCTTGA 1665 0.4276 MDPEEVNLNRESGKNSDGFVDRSKVRILLCDNDSKSSQEVFTLLLGCSYQVTSVRSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIARDKELRRIPVIMMSAQDEVSTVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSTNPETGMSTQQELESNIAIAAAVVEEPPNAHASECRPDVPRISDLRTGHFSSGPKKSELRIGESSAFFTYVKASVSKSNFEGIVHVDNNAAIRMRVEDAHQSCAQHRVNGLQTHANGETCESQSQDDFPSSNSFPDSFSIERSCTPPASMDVSPQNHPKEENLPPGTVHPRNGTHGSELDVSTMATQHAYPYYMSGGFNHVMMSSSAQMYQKNIQDMQNHACSAMIAQYNHLPQVPPHAMGMTSYPYYPMSPYLQPGQIPTSHPWPSFGGSSSSEVKLSIGDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVKGQFVRKLNGANVDLNGQPASIDYDENLDEEDDQGARDSSPEDA* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0415 554 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 6 538 - -
Lan15g0415 554 Pfam Response regulator receiver domain 27 138 IPR001789 GO:0000160
Lan15g0415 554 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 538 IPR045279 GO:0009736
Lan15g0415 554 SMART REC_2 25 140 IPR001789 GO:0000160
Lan15g0415 554 Gene3D - 25 229 - -
Lan15g0415 554 MobiDBLite consensus disorder prediction 173 203 - -
Lan15g0415 554 MobiDBLite consensus disorder prediction 305 347 - -
Lan15g0415 554 SUPERFAMILY CheY-like 21 150 IPR011006 -
Lan15g0415 554 MobiDBLite consensus disorder prediction 525 554 - -
Lan15g0415 554 MobiDBLite consensus disorder prediction 305 369 - -
Lan15g0415 554 MobiDBLite consensus disorder prediction 534 554 - -
Lan15g0415 554 ProSiteProfiles CCT domain profile. 475 517 IPR010402 GO:0005515
Lan15g0415 554 Pfam CCT motif 475 517 IPR010402 GO:0005515
Lan15g0415 554 ProSiteProfiles Response regulatory domain profile. 26 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0415 Lan-Chr15 8775500 8786429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0415 270 553 Response Regulator Gene Family AT5G61380 43.709 5.87e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lan15g0415 Response_reg 3.8e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0415 K12127 - gmx:100271889 857.055