Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0411 ATGACTACTCCTACTACTCAATCCCCTCTCTCTTCTCTCGATGACTCTCTCTGTGATGTCGATGACTACGTTTCTGCAAATGAACCGAAAGGTTTTGCATTGGATATATTTCGTGATGTTTGCGAGCTTGTGCATGATGGGAATGCAGCATTTCGAGAGAACAGAATGGAAGAGGCAATCAACTTTTACTCAAGGGCCAATAACATCAAATATGGCGATCCGATCATCCTCAGCAATCGAAGTGCAGCTTATATTAGGATTAGTCAATATTTAAAGAACAGAGCTCCATCAGCTTCAGAACAAAGACCATTGAGTGGGCTTGACCCTACAACACTTGCTGAATTGGGTTTGAAGGATGCTGATAAACTTCTTGACCTCCAAAGTAATTCAGTAAAACCATACATTTTAAAGGCTAATGCTTTATCTCTGTTGGAGAAATTTGAGGAGGCCCGGGATGTTATTCTATCAGGCCTTCATGTCGATCCATTTAGTAATTCTCTTCGGACTTCTCTACAAAATTTGGAAAGAGAGTCATGCATAACTGGCACGAATACGCATGGACAACCAGAGCGAAATGATGACTTTGATTGCACTCTTTGCCTGAAGTTACTATATGAACCTGTTACAACCCCTTGTGGACATTCTTTTTGCCGATCATGTCTATTTCAAGCAATGGATCGTGGGAATAGATGCCCATTGTGCAGGACAGTTCTGTTTTTTAGTCCTAGAACGTGTGCCATCAGTGTGACATTGAAGAACATCATAGAAAAGAACTTTCCTGAGGAATATGCTGAACGGAAGCAAGAGCATGATAGTTTAATCAACTCTGGTGTAGATTTGCTCCCTCTATTTGTTATGGATGTTGTCATACCATGTCAAAAGTTTCCACTCAATATATTTGAACCTCGGTATAGACTAATGGTAAGAAGAGTAATGGAAGGCAATCATCGGATGGGAATGGTTATAATTGAGTCTTCAACAGGTTCGTTAGCCGAGTATGCTTGTGAAGTTGAAATCACAGAGTGTGAGCCACTTCCTGATGGTCGTTTCTATATAGAGATTGAAAGTCGCAGGAGATTTCGTATCATCCGGTCTTGGGATCAAGATGGATACCGTGTTGCAGAGGTCGAATGGATACAGGATATTATGCCAGCAGAAGGGACAAGAGAAAAAGAGACTTTACTGGAATTAATACATAATGCAGCAGAAAGTGCCCGATCATGGATAAGAAGAGCTAAAGAAGCCGCAAGACTAGATCAAAGAAGACTTGACAGAGTCGCGAGTATTGAAGCAATGATGCCCTCACTCGGAGACCCTGAGCGCTTCAGTTTTTGGCTGGCTACTCTTTCGAATCGGAGGCCTTCGGAAAGATTGGATCTCCTATCCATGAGAGATACTACTGAGAGGATTAGGCGAGGCCTGATATATCTCGGAGCAGAGGAACAAGGCTGCAGAATTCAATAA 1464 0.4214 MTTPTTQSPLSSLDDSLCDVDDYVSANEPKGFALDIFRDVCELVHDGNAAFRENRMEEAINFYSRANNIKYGDPIILSNRSAAYIRISQYLKNRAPSASEQRPLSGLDPTTLAELGLKDADKLLDLQSNSVKPYILKANALSLLEKFEEARDVILSGLHVDPFSNSLRTSLQNLERESCITGTNTHGQPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQAMDRGNRCPLCRTVLFFSPRTCAISVTLKNIIEKNFPEEYAERKQEHDSLINSGVDLLPLFVMDVVIPCQKFPLNIFEPRYRLMVRRVMEGNHRMGMVIIESSTGSLAEYACEVEITECEPLPDGRFYIEIESRRRFRIIRSWDQDGYRVAEVEWIQDIMPAEGTREKETLLELIHNAAESARSWIRRAKEAARLDQRRLDRVASIEAMMPSLGDPERFSFWLATLSNRRPSERLDLLSMRDTTERIRRGLIYLGAEEQGCRIQ* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0411 487 SUPERFAMILY PUA domain-like 281 476 IPR015947 -
Lan15g0411 487 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 6 478 - -
Lan15g0411 487 Pfam ATP-dependent protease La (LON) substrate-binding domain 281 477 IPR003111 -
Lan15g0411 487 PANTHER RING FINGER PROTEIN 127 6 478 - -
Lan15g0411 487 SUPERFAMILY RING/U-box 192 260 - -
Lan15g0411 487 ProSiteProfiles Zinc finger RING-type profile. 197 235 IPR001841 -
Lan15g0411 487 ProSiteProfiles Lon N-terminal domain profile. 278 479 IPR003111 -
Lan15g0411 487 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 276 IPR013083 -
Lan15g0411 487 Gene3D Tetratricopeptide repeat domain 39 177 IPR011990 GO:0005515
Lan15g0411 487 SMART ring_2 197 234 IPR001841 -
Lan15g0411 487 ProSitePatterns Zinc finger RING-type signature. 212 221 IPR017907 -
Lan15g0411 487 SUPERFAMILY TPR-like 42 171 IPR011990 GO:0005515
Lan15g0411 487 SMART lon_5 280 479 IPR003111 -
Lan15g0411 487 Pfam Zinc finger, C3HC4 type (RING finger) 197 234 - -
Lan15g0411 487 Gene3D - 279 381 IPR046336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0411 Lan-Chr15 8534799 8548087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0411 183 238 C3H Transcription Factor Family AT1G74990 35.593 1.39e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0411 - - gmx:100802277 734.947