Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0401 ATGACCAATCATTCCCAAACACAACACAACGACACCATCGACCCAAACAGCGGTTTTTGCTCTCAAACAAGAACATTCCACAGCCTCCGTCCAAACATCCTTCTTCCTCCACCCTCTCAACCACTCTCTCTCACCGACTACACCCTCTCTCTCCTCCCCTCCACCGCCGTCACCGCCACCGTCCTCATCGACTTCGCCACCGACACCCACCTCTCCTACTCCCTCTTCCTTCGCCAAATTAAATCCCTCACTTCCTCCCTCCAATCCTTATTCCCTTCTCTTTCAAAAGGCCACGTGGCACTCATCCTCACCCCTTCTTCCCTGCATGTTCCCGTACTCTATTTCTCTCTCCTCTCCCTCGGTGTTGTTATAGCTCCTGCTAACCCGCTCAGTTCCCCGTCCGAGTTGACTCACCTGGTTCAACTCACTAAACCCGTCATCGCTTTCGCAACTTCATCAGTCGCAAATCACATTCCAAATCTCAAATTCGGTACTGTTATAATCGACTCACCTCGATTCATTTCATTACTAAATAACTTCCATAACAAATCGGAACCCTGCCGAGTCGAACTTAGTCAGTCCGACTCGGCTGCAATTCTCTTCTCTTCCGGAACCACCGGCCGAGTCAAGGGAGTGGAACTCACGCACCGGAATTTCATAGCATTAATCGGAGGTTTCTACCACATCAAGCACTTGACACAAGAACAACAAGAGGAAGAGACACAACCGGTGTCGCTATTCACGCTTCCACTGTTCCACGTGTTCGGGTTCTTCATGCTGGTGAGGGCAATAGCGATGGGGGAGACATTGGTGTTGATGCAGAGGTTCGATTTCGAAGGGATGTTGAAGGCGGTGGAGAGGTACGGAATCAGCTACATGCCGGTTTCGCCGCCGCTTGTGGTGGCACTGGCGAAGTCGGAGCTGGTGAATAAATACAATGTTAGCTCGCTGAAGTTGCTGGGATGCGGTGGCGCGCCTCTTGGCAAGGAGGTGGCGGAGAGCTTCAGTGCTAGATTTCCTAATACTGAAATTGTGCAGGGATATGGTCTGACTGAAAGTGGAGGAGGGGCAGCAAGAATGGTAGGGGATGATGAGGCTAAGCGCCATGGTTCGGTAGGCCGACTAGCAGAAAGTATGGTGGCCAGGATAGTGGACCCTGTAACTGGAGAAGCATTACCCCCTGGCCAAAAAGGAGAACTGTGGTTGAAAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAAAAGGCAACCGTTGAAACATTGGATTCAGAGGGATGGCTGAAGACTGGTGATCTTTGTTATTTTGACTCTGATGGTTTCCTTTACATTGTAGATAGACTGAAGGAATTGATTAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATTTACTTCACACCAATCCTGAAATTGTGGATGCTGCAGTAATTCCGTATCCTGATGAAGATGCAGGGCAGATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAGCAACATCACTGCATCTCAGGTCATGGAGTTTGTGGCAAAGCAGGTATCACCATACAAGAAGATACGAAGAGTTTCTTTTATTAACTCTATACCAAAATCCCCAGCAGGCAAAATTTTGAGAAGAGAATTAGTTAATTATGCTCAATCAAGTGGTTCTTCCAAATTGTGA 1671 0.4829 MTNHSQTQHNDTIDPNSGFCSQTRTFHSLRPNILLPPPSQPLSLTDYTLSLLPSTAVTATVLIDFATDTHLSYSLFLRQIKSLTSSLQSLFPSLSKGHVALILTPSSLHVPVLYFSLLSLGVVIAPANPLSSPSELTHLVQLTKPVIAFATSSVANHIPNLKFGTVIIDSPRFISLLNNFHNKSEPCRVELSQSDSAAILFSSGTTGRVKGVELTHRNFIALIGGFYHIKHLTQEQQEEETQPVSLFTLPLFHVFGFFMLVRAIAMGETLVLMQRFDFEGMLKAVERYGISYMPVSPPLVVALAKSELVNKYNVSSLKLLGCGGAPLGKEVAESFSARFPNTEIVQGYGLTESGGGAARMVGDDEAKRHGSVGRLAESMVARIVDPVTGEALPPGQKGELWLKGPTIMKGYVGDEKATVETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLHTNPEIVDAAVIPYPDEDAGQIPMAFVVRKPGSNITASQVMEFVAKQVSPYKKIRRVSFINSIPKSPAGKILRRELVNYAQSSGSSKL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0401 556 Gene3D - 32 449 IPR042099 -
Lan15g0401 556 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 33 545 - -
Lan15g0401 556 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Lan15g0401 556 Gene3D - 450 552 IPR045851 -
Lan15g0401 556 CDD 4CL 36 544 - -
Lan15g0401 556 SUPERFAMILY Acetyl-CoA synthetase-like 66 549 - -
Lan15g0401 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Lan15g0401 556 Pfam AMP-binding enzyme 60 454 IPR000873 -
Lan15g0401 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 33 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0401 Lan-Chr15 7802694 7806489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0401 7 556 Monolignol Biosynthesis Gene Families AT5G63380 59.220 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0401 K01904 - gmx:100777435 880.167