Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0400 ATGCAGCTCCTCTCTCTATATATATTAACAAATAAAAGAGACTTTTTTTTGCTGACCCAGAAAGTAGAAAGCATTATCAAAAAAGAAAAGAAAAGTAGAAAGGAGAAGCATATGGAGTTTGGTTCAGAAAGATCTGATTCTGATCATGGTGGTGAAGTCAAAGATGAGAAGAGAAGTGACTCTGGTGTTGGTGATGAGACTGCTGTTATCAAGGAGCCACCCATGACTAATACCAAAAGAACAATTCCAGAGGATGGACCAAGTGCATCCATAAACAAAAAGGAAGAGGTTGATGAACTTGAAAATGCCAAAGCCAAAATGAGGGAAATAAGAGAAGAAAATCAAAGGCTAAAGATGTGTTTGAACCGAGTCATGAATGATTACAAGACACTACAAGTGCATATCCACAATATTACTCAACAAGAGACGCCAAATTCTTCTGATAAAGAAAATACCAACCTTCAAGAAATAATAAAGGAATCAGAACTAGTTTCCCTTAGTCTTGGAAATTTCCTAAGTAATCCAAGAAACGATGAGAAAGCAAAAACACAAATGAAAGAGAAAGAATATGAAAACTTATCCCTTGGACTAGAATGCAAATTTGAAACATCAAAATCAACAAGCACAACTGAACATTTGTTAAAGCCAAGCCCTGAAAACAGTTCTGAAGTACCAAAGGAAGAAGAAGCTGGAGAAACTTGGACACCTCATAAGGATGAAGTTTCACTAGAAAATCCTGCAAAGAAAACTAGAGTTTGTGTTAGAGCAAGATGTGACACCCCAACGTTGAATGATGGATGTCAATGGAGGAAATATGGACAGAAGATTTCGAAGGGAAATCCTTGCCCTAGAGCTTATTATCGGTGCACAGTTGCACCATCATGCCCAGTAAGAAAACAGGTGCAAAGATGTGCTCAAGACATGTCCATTTTAATCACCACTTATGAAGGGACACACAACCACTCTCTTCCTCTCTCAGCCACAGCCATGGCTTCAACAACTTCTGCAGCTGCTTCCATGTTATTAACTGGCTCATCAACCTCTCACTATTCCTCAATGCCTCCTTCATCAGCCACAACCACCACTTCTTCTAATCTTCATCATGGCTTGAACTTATACTTACCAAATGATGGTTCCAAACCAAAGCAATTCTATTTGTCACATCCTGCACTTTCAATATCCTCAACTTCACAATCACACCCTACAGTTACTCTTGACCTCACTTCCAATATTCCACTTTCTAGTTCCTCATCAGCTCCTAACTTTGGTGGTAGATTATTTACTTCTTCAAACTATAACCCTATAACAAGACCATTATTATATCCTTCTTCCACAAGCTTGAACTTCACTTCCTCTGAATCCAATGCAATGTCTTGGAGCAATGGCTTCCTCAGCCACAATGCACAACCATATAGTAATAATAACAACAGGAACATCCTTAGCAATATAAACCTTGGGAGACAACCAATGGAAAATATGTACCATTCCTACATGCAAAGGAACAACAACAATGCTCCAATCCCTCATCAAGAAGCTCAACATTCTATGCCAGATACTATAGCTGCTGCAACTAAATTCATCATAGCTGATCCTAGTTTTCAGTCATCTTTGGCAGCAGCACTTACTTCAATCATTGGCACTGGAAATACTCAAGGAAACCAGAGTGGTGGAGAAGATTCGGGTAAGAATAAGAAATGGGGTGACTTGTTTCCATCATCTTCTAGTAGAGACAACAACAATTAA 1743 0.3878 MQLLSLYILTNKRDFFLLTQKVESIIKKEKKSRKEKHMEFGSERSDSDHGGEVKDEKRSDSGVGDETAVIKEPPMTNTKRTIPEDGPSASINKKEEVDELENAKAKMREIREENQRLKMCLNRVMNDYKTLQVHIHNITQQETPNSSDKENTNLQEIIKESELVSLSLGNFLSNPRNDEKAKTQMKEKEYENLSLGLECKFETSKSTSTTEHLLKPSPENSSEVPKEEEAGETWTPHKDEVSLENPAKKTRVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLTGSSTSHYSSMPPSSATTTTSSNLHHGLNLYLPNDGSKPKQFYLSHPALSISSTSQSHPTVTLDLTSNIPLSSSSSAPNFGGRLFTSSNYNPITRPLLYPSSTSLNFTSSESNAMSWSNGFLSHNAQPYSNNNNRNILSNINLGRQPMENMYHSYMQRNNNNAPIPHQEAQHSMPDTIAAATKFIIADPSFQSSLAAALTSIIGTGNTQGNQSGGEDSGKNKKWGDLFPSSSSRDNNN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0400 580 SUPERFAMILY WRKY DNA-binding domain 256 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0400 580 MobiDBLite consensus disorder prediction 221 237 - -
Lan15g0400 580 CDD bZIP 93 123 - -
Lan15g0400 580 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0400 580 MobiDBLite consensus disorder prediction 28 94 - -
Lan15g0400 580 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0400 580 MobiDBLite consensus disorder prediction 28 65 - -
Lan15g0400 580 Coils Coil 90 127 - -
Lan15g0400 580 Gene3D WRKY domain 248 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0400 580 Pfam WRKY DNA -binding domain 264 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0400 580 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 52 558 - -
Lan15g0400 580 MobiDBLite consensus disorder prediction 548 580 - -
Lan15g0400 580 MobiDBLite consensus disorder prediction 207 237 - -
Lan15g0400 580 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 558 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0400 Lan-Chr15 7731653 7737334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0400 107 551 WRKY Transcription Factor Family AT5G15130 40.535 8.39e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan15g0400 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0400 - - gmx:100804403 547.354