Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0396 ATGGAAGGAGGAGGAGCTGCTCCGCCTGCTGACACCGTCATGTCAGACGCAGCGCCGCCGCCACCGCATCCCAACCCACAGCAACATCACCACCAGCAGCATCCGGTTCCAGGGATGGGGGTGGAGAATATTCCGGCGACGTTGAGCCACGGTGGAAGGTTCATCCAATACAATATATTTGGTAATATATTTGAAGTCACTGCTAAATACAAACCCCCCATCATGCCAATCGGAAAAGGGGCTTATGGTATCGTTTGCTCTGCCCTGAATTCCGAGACGAATGAGCATGTTGCTATCAAGAAGATTGCTAATGCTTTTGACAACAAGGTTGATGCCAAGAGAACTCTCCGTGAAATCAAGCTGCTTCGCCACATGGATCATGAAAATGTTGTCGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAAGTATTCAATGATGTTTACATTGCGTATGAGCTAATGGACACTGATCTTCATCAAATTATTCGCTCAAACCAAGCACTGTCTGAGGAGCACTGCCAGTATTTTCTGTATCAAATCCTTCGTGGGTTGAAGTACATACATTCTGCGAATGTTCTGCATAGAGACTTAAAACCTAGCAACCTGCTTCTAAATGCCAATTGTGACCTGAAAATTTGTGATTTTGGACTGGCTCGTGTCACTTCTGAAACTGATTTTATGACTGAATATGTGGTTACAAGATGGTACCGTGCACCAGAACTTCTGTTAAACTCTTCTGATTACACAGCAGCAATTGATGTTTGGTCTGTTGGTTGTATTTTCATGGAGCTGATGGATCGAAAGCCACTGTTTCCTGGCAGAGATCATGTGCATCAGCTGCGTCTACTTATGGAGCTAATTGGCACCCCATCGGAAGCTGATTTGGAATTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTCTTTACCGCCGCCAATCTTTCCAAGAAAAGTTTCCGCAAGTCCATCCTGCAGCTATAGATCTGGTTGAAAGAATGTTGACTTTTGATCCTAGACAAAGGATTACTGTTGAAGATGCACTGGCACACCCTTACTTAACATCACTGCATGACATTAGTGATGAACCTGTGTGCATGAATCCTTTCAACTTCGACTTTGAGCAACATGCTTTGAGTGAGGAACAGATGAAGGAGCTGATATACCGAGAAGGTCTAGCATTTAACCCGGGGTATCAGCAGTAG 1212 0.448 MEGGGAAPPADTVMSDAAPPPPHPNPQQHHHQQHPVPGMGVENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKVDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLEFLNENAKRYIRQLPLYRRQSFQEKFPQVHPAAIDLVERMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMNPFNFDFEQHALSEEQMKELIYREGLAFNPGYQQ* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0396 403 ProSitePatterns Protein kinases ATP-binding region signature. 77 101 IPR017441 GO:0005524
Lan15g0396 403 SMART serkin_6 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0396 403 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0396 403 Gene3D Transferase(Phosphotransferase) domain 1 155 383 - -
Lan15g0396 403 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 400 - -
Lan15g0396 403 CDD STKc_TEY_MAPK 64 399 - -
Lan15g0396 403 ProSitePatterns MAP kinase signature. 106 209 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan15g0396 403 MobiDBLite consensus disorder prediction 14 28 - -
Lan15g0396 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Lan15g0396 403 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 400 - -
Lan15g0396 403 MobiDBLite consensus disorder prediction 1 43 - -
Lan15g0396 403 Gene3D Phosphorylase Kinase; domain 1 54 393 - -
Lan15g0396 403 SUPERFAMILY Protein kinase-like (PK-like) 76 364 IPR011009 -
Lan15g0396 403 Pfam Protein kinase domain 76 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0396 403 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0396 Lan-Chr15 7563104 7567489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0396 1 403 MAP Kinase Gene Family AT2G43790 85.679 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan15g0396 Pkinase 4.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0396 K14512 - gmx:547616 748.043