Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0395 ATGTCAATGATTTATTCATCATTATATAACTCAAATCCTTCATCTGAAGCATTTATCCAAGATGGGTTGACATCAACTCATTCATTGGTGTTTGAGAGTGAGAAAGGAGAGTTAGTGAAGTACCCTAAAGAAACTGAAAGGGTAGGAAAGAATGAGATCTCTGAGGCCAAAGCTTTGGCAGCTTTGAAGAATCATAGTGAAGCAGAAAGGAGGAGAAGGGAGAGAATAAATGGTCATTTTGAAACACTACGTGGTCTAGTACCCTCTACTGAAAAGATGGATAAAGCAACATTGCTAGCTGAAGTTATTAACCAAGTGAAGGAATTGAAGAAGAATGCAATGGAATCAAGCAAAGGCCTTACAATCCCAAAGGATTCAAATGAAGTGAAAGTTGAACCATATGATGATGAAGGAGAAGGAGATGGATCAATGTCTTACAAGGCTTCTATCTGCTGTGATTACACCCCTGATATGCTATCTGACCTTAGACAAACACTTGATGCCCTTAAACTAAAGCTAATGAGGACAGAAATATCAACTTTGGGAAAGAGGATGAAGAATGTGTTTATCTTTAAATGTTGCAAAGGGGACATTACTAACATTGAGGCATGCCAAGCTCTTCAAATTTCTGTTCAACAAGCACTAAGTTCTGTAGTGGATAAGGCTTCTAGCTCATTGGAGTATTTACCAAGAACATCACATCCAAACAAGAGGAGAAGACTATGCTCTATTGAAACATCTACTAACTCTTGCAACCATGAATCTTGTTCTTGCTGA 777 0.381 MSMIYSSLYNSNPSSEAFIQDGLTSTHSLVFESEKGELVKYPKETERVGKNEISEAKALAALKNHSEAERRRRERINGHFETLRGLVPSTEKMDKATLLAEVINQVKELKKNAMESSKGLTIPKDSNEVKVEPYDDEGEGDGSMSYKASICCDYTPDMLSDLRQTLDALKLKLMRTEISTLGKRMKNVFIFKCCKGDITNIEACQALQISVQQALSSVVDKASSSLEYLPRTSHPNKRRRLCSIETSTNSCNHESCSC* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0395 258 PANTHER TRANSCRIPTION FACTOR BHLH30 10 251 IPR045847 GO:0003700|GO:0006355
Lan15g0395 258 Pfam Helix-loop-helix DNA-binding domain 64 109 IPR011598 GO:0046983
Lan15g0395 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 109 IPR011598 GO:0046983
Lan15g0395 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 112 IPR036638 GO:0046983
Lan15g0395 258 SMART finulus 66 115 IPR011598 GO:0046983
Lan15g0395 258 CDD ACT_UUR-ACR-like 149 215 - -
Lan15g0395 258 Gene3D - 56 118 IPR036638 GO:0046983
Lan15g0395 258 PANTHER DNA BINDING PROTEIN-LIKE 10 251 - -
Lan15g0395 258 Coils Coil 159 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0395 Lan-Chr15 7548324 7551622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0395 44 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 49.660 2.29e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan15g0395 HLH 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0395 - - gmx:100804756 344.739