Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0390 ATGGTGTCTGAAAACAACGAAGATGATCACCCACGTGGTAATTTTCATGGTACAAGTGCTACGGTCACTCTTGCTACAACTTTGTCTTTAGTTGCTGTCATATTAGTAATTGCTCTTGTCTATTTCTATGCAAGACATCACCTACGACTCGATCAAAGAAGGCGCCAACAAAGCTTTCTTCGTCGCATCAACAATCAAATTGCAAACGCTGATGTCAACTCTTCAAGGTCACCAAATTCTGGCCTTGACCCTATTGTCATAGCCTCCTTGCCTAGACTCTTGTACAAGGAAACAAACCAGTTCATCCAAGGTGATGTTGTAGAGTGTTCTGTTTGTTTAGGCACAATTGTGGAAGACGAAACAATTAGAGTGTTGCCAAATTGTAAGCATGTTTTCCATATTGATTGTGTTGATAAGTGGTTTGCTTCAAATAGTACTTGCCCGGTTTGTCGAGCCGTGGTTGAACCTACAGTGCAGCCAGAGCTTGATAATTCGGCTACTACTGAGGTCCAACCCACGGCACCACCGGTCGAGGATGTGTCACATGTTGATGTTAGTCACGAAACGGAAAAGGTTAGTTGTTCAGGCTTGAGAATAGCATCTTTTCCTAGGATGGTTATTGGCATGGAAAGATCTTTGAGAAGGAGCTATGATGGCTCTGCTGCTGTTGAAGATATAGAAAATCAGTGA 690 0.4275 MVSENNEDDHPRGNFHGTSATVTLATTLSLVAVILVIALVYFYARHHLRLDQRRRQQSFLRRINNQIANADVNSSRSPNSGLDPIVIASLPRLLYKETNQFIQGDVVECSVCLGTIVEDETIRVLPNCKHVFHIDCVDKWFASNSTCPVCRAVVEPTVQPELDNSATTEVQPTAPPVEDVSHVDVSHETEKVSCSGLRIASFPRMVIGMERSLRRSYDGSAAVEDIENQ* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0390 229 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Lan15g0390 229 PANTHER RING FINGER DOMAIN-CONTAINING 6 228 - -
Lan15g0390 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 157 IPR013083 -
Lan15g0390 229 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 6 228 - -
Lan15g0390 229 SUPERFAMILY RING/U-box 108 157 - -
Lan15g0390 229 CDD RING-H2_PA-TM-RING 108 151 - -
Lan15g0390 229 Pfam Ring finger domain 108 151 IPR001841 -
Lan15g0390 229 SMART ring_2 109 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0390 Lan-Chr15 7513733 7514768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0390 6 215 C3H Transcription Factor Family AT2G42360 34.389 3.48e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0390 K19038 - gmx:100786701 219.164