Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0366 ATGGCATCATCATCACCAGCAGAACTAAGCCTAGATTGTAAGCCCCAAAGCTATTCCATGCTGCTGAAATCATTTGGAGATCATCAAAGTGATCAATGCAACAAGCTTGAAGAGTTCCTATCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCATTCAAGCGTGAGCTTCCTCTCTGCATGCAACTCCTCACCAATGCCGTGGAGGCTTCAAAGCAGCAACTTCATACCATCAGAACAAACCATCAAGTTACAAGGCCTATTATGGAAGATTTCATACCCATAAAACAATCAAACTCTGAAGAAAACACTGACAAGGCATCAAACATGTTTGATAATAAGGCCAATTGGATGACATCTGCTCAACTATGGAGCCAAACAAGCGAAGGAATTACAAAACCACAATCAACAATTACACCCACCAAAGAATCCTATGATATTGGTTTCATGAGCATGAACCCTAAGCTAGCTCTACACAACAAACATAGGAATGGTGGAGCCTTCATACCATTTTCGAAAGAACTAAACCCATGCCCATTAGGTTCTTCTGCTTTAAGAGATGTTCCTGAGTTGGCACTTGTATCTACTGCTGAGAAAGATTTGGAGGAAAAGAATTGTGAAGAGGTAGAGACATGTTACAAGAGGGAGAATTTAGAGAAAGGAGGAAATGATGGAGGGGTTATTGATCAAGGAAAAGGTGCTGAAGTTGCATGTGAGGGACAAACAACAAATGTTGCTACTAATAGAAAAGCAAGAAGGTGTTGGTCACCGGATTTGCATCGCCGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCTACCCCAAAACAGATTAGGGAGTTGATGAAGGTTGACGGTTTGACTAATGATGAAGTGAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCCGGTCCAAGCCTCCAAACCGGCGCACCCGCACCTCAGTTGGTAGTCCTGGGAGGAATCTGGGTCCCACCGGAATACGCCTCAGCGGCAGCTGCCTCCGCTCACACTGGCGCCCCCACCGTGTATGGACCGCACCCTACCTTACACGCGCCACCACCACACTACTGTGCTGCCACTCAATTACCCCAAGAGTTTTACACTGTAGCACAAACCCAGCCACCACTTCCGCCACAACCACACCACCACGCCTTTCACCACCTTCAGATGTACAATACCGCACAACACAGCCGAAACTCTCCGGAGCCCGAGGTTGCCGGAGGCGGTGATCGGTCGGAGAGCATCGAGGATGGGAAGTCGGAGAGTGGTAGCTGGAAGGGAGAGAGTGGTGAGAAGGAAGGAGAGAGGAAAGGGGAAGAGAGCACTGGGAGTGAAATCAATCTCAAGTTTTAG 1374 0.4702 MASSSPAELSLDCKPQSYSMLLKSFGDHQSDQCNKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASKQQLHTIRTNHQVTRPIMEDFIPIKQSNSEENTDKASNMFDNKANWMTSAQLWSQTSEGITKPQSTITPTKESYDIGFMSMNPKLALHNKHRNGGAFIPFSKELNPCPLGSSALRDVPELALVSTAEKDLEEKNCEEVETCYKRENLEKGGNDGGVIDQGKGAEVACEGQTTNVATNRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGPSLQTGAPAPQLVVLGGIWVPPEYASAAAASAHTGAPTVYGPHPTLHAPPPHYCAATQLPQEFYTVAQTQPPLPPQPHHHAFHHLQMYNTAQHSRNSPEPEVAGGGDRSESIEDGKSESGSWKGESGEKEGERKGEESTGSEINLKF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0366 457 SUPERFAMILY Homeodomain-like 248 308 IPR009057 -
Lan15g0366 457 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 457 - -
Lan15g0366 457 Gene3D - 249 307 - -
Lan15g0366 457 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 457 IPR044787 GO:0003700|GO:0006355
Lan15g0366 457 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 250 305 IPR006447 GO:0003677
Lan15g0366 457 Coils Coil 36 56 - -
Lan15g0366 457 Pfam Myb-like DNA-binding domain 252 303 IPR001005 -
Lan15g0366 457 MobiDBLite consensus disorder prediction 416 451 - -
Lan15g0366 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 307 IPR017930 -
Lan15g0366 457 MobiDBLite consensus disorder prediction 400 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0366 Lan-Chr15 6840293 6844380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0366 1 457 G2-like Transcription Factor Family AT2G03500 49.290 2.47e-120 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan15g0366 Myb_DNA-binding 9.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0366 - - gmx:100815048 545.043