Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0354 ATGGAGCCCATGGACATCGTTGGGAAAGCTAAGGAAGATGCTTCTCTTCCTAAAGCCACAATGACGAAAATTATTAAAGAGATGTTGCCCCCAGATGTCCGTGTTGCAAGAGATACTCAAGATCTATTAATTGAGTGTTGCGTTGAGTTCATAAACCTCCTCTCATCAGAGTCCAATGAAGTCTGTGGTAGGGAAGAAAGAAGGACAATTGCACCTGAGCATGTATTGAAGGCTTTAGGGGGTCTTGGTTTTGGTGAGTACATCGAGGAAGTTTATGCAGCATATGAACAGCACAAAGTGGAGACTATGCAGGACTCTCTAAAAGGAGCTAAGTTGAGCAACAGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCTGAGGCGCGTGCTAGAATGAACGGTGGGGCAATTGCTTCTAAGCAGCCAGATACTGACCAAAGTTTTGAGAGCTAA 471 0.4501 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLLSSESNEVCGREERRTIAPEHVLKALGGLGFGEYIEEVYAAYEQHKVETMQDSLKGAKLSNRAEMTEEEALAEQQRMFAEARARMNGGAIASKQPDTDQSFES* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0354 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Lan15g0354 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Lan15g0354 156 Gene3D Histone, subunit A 5 143 IPR009072 GO:0046982
Lan15g0354 156 Coils Coil 115 135 - -
Lan15g0354 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0354 Lan-Chr15 6217148 6227467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0354 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 79.221 5.52e-88 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lan15g0354 CBFD_NFYB_HMF 1.2e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0354 K21751 - gmx:547635 285.419