Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0350 ATGGCGGCTGCGACAGTTGCGGCGGTTACCGAGCCAAGAAAGCAACCTCGCCCCGGCAAGGGAGGCTTCGAGGCTCACGGCCTAAGTGAAGAGGAAGCGCGTGTCCGAGCCATCTCCGAGATCGTCAATTCCATGGTAGACCTCTCTCGCAAGGGCCAGAACGTCGATCTCAACGCGCTCAAATCCGCCGCGTGTCGCAAGTACGGCCTCTCACGCGCCCCCAAGCTCGTTGAGATGATTGCGGCGCTCCCTGACTCTGAACGGGAGGCGCTGCTTCCTAAGCTCCGGGCCAAACCGGTTCGAACCGCTTCGGGGATTGCGGTGGTGGCAGTTATGTCGAAGCCGCATCGGTGTCCTCATATCGCGACGACGGGGAATATATGTGTTTATTGTCCTGGAGGACCTGACTCGGATTTTGAGTATAGTACTCAGTCTTATACTGGATATGAACCTACTAGCATGCGTGCAATTCGAGCAAGGTATAACCCATATGTCCAAGCAAGAAGCAGGATAGATCAGCTTAAGCGTTTGGGTCATAGTGTAGACAAGGTTGAGTTCATCTTAATGGGTGGCACTTTCATGTCACTTCCAGCTGATTACCGTGATTACTTTATAAGGAATCTTCATGACGCATTGTCTGGACACACTTCTGCCAATGTAGAAGAGGCAGTGGCATATTCCGAACATAGCGCAACTAAGTGTATTGGCATGACGATTGAAACGAGGCCAGATTATTGTCTTGGGCCTCACTTGCGACAAATGCTTTCTTATGGCTGTACACGATTGGAGATTGGAGTCCAAAGCACCTATGAGGATGTTGCCCGTGACACGAATAGAGGTCATACTGTGGCTGCTGTAGCCGATTGTTTTTCTTTGGCAAAAGATGCTGGTTTCAAGGTTGTTGCTCACATGATGCCTGATCTTCCAAATGTTGGCGTTGAAAGGGACATGGAAAGTTTCCGTGAGTTTTTTGAGAGTCCCTCATTTAGAGCAGATGGGCTTAAAATATATCCTACACTTGTAATACGTGGAACTGGGCTTTATGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCACCTGAGCAACTTGTGGACATTGTAGCAAGGATCCTTGCTATGGTACCTCCCTGGACACGTGTTTATAGAGTTCAGCGAGATATTCCCATGCCTCTGGTGACATCTGGAGTTGAGAAAGGGAATCTGAGGGAGCTAGCATTAGCTCGAATGGAAGACCTGGGATTGAAATGCCGTGATGTTCGTACCAGAGAAGCTGGAATTCAGGATATCCACCACCAAATTAAGCCAGAAGAGGTGGAGCTTGTCCGTCGTGACTATATGGCAAATGAGGGTTGGGAAACATTTCTGTCTTATGAAGATACACGACAGGATATCCTTGTGGGTCTGTTGCGACTGCGAAAATGTGGCCGGAACACTACCTGTCCAGAACTTACGGGGAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCTGTACCAGTTCATGGGCGGGATGCTGACAAGCTACAACACCAGGGTTATGGTACACTTCTAATGGAGGAGGCAGAGCGTATTGCTCGCAGAGAACACAGATCAACAAAAATAGCTGTAATTTCGGGGGTTGGTACACGCCATTATTACAGGAAACTAGGATATGAGCTTGAAGGGCCTTACATGGTGAAATTACTGTTATAA 1701 0.4856 MAAATVAAVTEPRKQPRPGKGGFEAHGLSEEEARVRAISEIVNSMVDLSRKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPDSEREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELTGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKLLL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0350 566 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 6 565 IPR039661 -
Lan15g0350 566 Pfam Acetyltransferase (GNAT) family 418 554 IPR000182 GO:0016407
Lan15g0350 566 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 306 561 IPR016181 -
Lan15g0350 566 SUPERFAMILY Radical SAM enzymes 138 377 - -
Lan15g0350 566 Gene3D - 417 565 - -
Lan15g0350 566 SMART MiaB 108 370 IPR006638 GO:0003824|GO:0051536
Lan15g0350 566 PIRSF HAT_Elp3 23 566 IPR034687 -
Lan15g0350 566 SFLD ELP3-like 56 565 IPR034687 -
Lan15g0350 566 SFLD elongater protein-like 56 565 - -
Lan15g0350 566 Pfam Radical_SAM C-terminal domain 332 411 IPR032432 -
Lan15g0350 566 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 415 566 IPR000182 GO:0016407
Lan15g0350 566 TIGRFAM ELP3: radical SAM enzyme/protein acetyltransferase, ELP3 family 53 564 IPR034687 -
Lan15g0350 566 MobiDBLite consensus disorder prediction 1 26 - -
Lan15g0350 566 ProSiteProfiles Radical SAM core domain profile. 101 391 IPR007197 GO:0003824|GO:0051536
Lan15g0350 566 PANTHER ELONGATOR COMPLEX PROTEIN 3 6 565 IPR034687 -
Lan15g0350 566 Pfam Radical SAM superfamily 126 314 IPR007197 GO:0003824|GO:0051536
Lan15g0350 566 CDD Radical_SAM 115 362 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan15g0350 Radical_SAM 3.6e-18 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0350 K07739 - gmx:100818764 1081.24