Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0305 ATGAAGTGGGAAATGGAAGTCCTCTCTCCTTTACCATATATTGACAACAACTCCAACACTAAATGGACTCTTGAAGAGAACAAACTTTTTGAGAATGCTCTTGCAGTTCATGATAAGGACACTCCAGATAGATGGCACAAAGTGGCTGAAATGATACCAGGAAAAACAGTTTGTGATGTGATGAGACAGTACGTGGAGTTAGAAGCAGATGTTAGTGACATAGAAGCTGGATTGATCCCAATTCCTGGCTATAAGAATACCACATCACCTTTCACCTTAGATTGGGTCAACTCTGATGGCTATGATGACGGGTTTAAAGGACTCATTGCAAAGAGATCTTCCTCTGCTAGACCTCATGAACAGGAAAGGAAGAAAGGAGTGCCGTGGACTGAAGAAGAACACAAATTGTTTCTACTGGGATTGAAGAAGTATGGCAAAGGTGATTGGCGAAATATTTCTCGCAATTTTGTTACAACAAGAACCCCAACTCAGGTGGCTAGTCATGCTCAGAAGTACTTCATCAGACAAATTTCAGGGGGCAAAGACAAGAGAAGAGCTAGCATACATGACATAACAATTGTTAATCTCGCCGATAGCGAAAGAATTTCTCCATCAGAAGACAGCAAGAGTTCCATTTCACCACAGCATTCCACGATGTTCTCACACCAGCAGCAGCAAAATCGTACTCCGACCACATCCAGGGACTATTTTCAGTGGAATCATAAGCCTGATGCAGGATTAGCTATGACACTCAATTCTTCACATGAAGAAGTATACATATCTCCTTATGAGGGTAACTCCTATGAATCTAAAATGCTGGACCAAAATCTGCATAGAAATGCTCTTCATGAGTTTTCTTACTTAGTACCTCAACCACAAAACATGGTTTTCCAAATGCAATCCACCCAACATTATTCTCATGCATGA 927 0.411 MKWEMEVLSPLPYIDNNSNTKWTLEENKLFENALAVHDKDTPDRWHKVAEMIPGKTVCDVMRQYVELEADVSDIEAGLIPIPGYKNTTSPFTLDWVNSDGYDDGFKGLIAKRSSSARPHEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQISGGKDKRRASIHDITIVNLADSERISPSEDSKSSISPQHSTMFSHQQQQNRTPTTSRDYFQWNHKPDAGLAMTLNSSHEEVYISPYEGNSYESKMLDQNLHRNALHEFSYLVPQPQNMVFQMQSTQHYSHA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0305 308 Pfam Myb-like DNA-binding domain 21 62 IPR001005 -
Lan15g0305 308 Pfam Myb-like DNA-binding domain 128 173 IPR001005 -
Lan15g0305 308 CDD SANT 128 173 IPR001005 -
Lan15g0305 308 ProSiteProfiles SANT domain profile. 129 177 IPR017884 -
Lan15g0305 308 SUPERFAMILY Homeodomain-like 122 176 IPR009057 -
Lan15g0305 308 CDD SANT 21 67 IPR001005 -
Lan15g0305 308 PANTHER MYB TRANSCRIPTION FACTOR MYB51 15 282 - -
Lan15g0305 308 Gene3D - 15 81 - -
Lan15g0305 308 MobiDBLite consensus disorder prediction 202 233 - -
Lan15g0305 308 Gene3D - 127 177 - -
Lan15g0305 308 SMART sant 125 175 IPR001005 -
Lan15g0305 308 SMART sant 18 70 IPR001005 -
Lan15g0305 308 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 15 282 IPR043363 -
Lan15g0305 308 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 124 176 IPR006447 GO:0003677
Lan15g0305 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 121 177 IPR017930 -
Lan15g0305 308 SUPERFAMILY Homeodomain-like 20 72 IPR009057 -
Lan15g0305 308 ProSiteProfiles Myb-like domain profile. 121 173 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0305 Lan-Chr15 4168829 4170451 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan15g0305 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0305 - - gmx:100784163 442.58