Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0286 ATGTTTGACTGTGGTTACAAGTCACAATACATGGATGGCCAGCGGGAAAAGTTCGTGAGGTTGGATGATTTCGATTCTAGACTATCTTCACCTTCTGGTGCTGGAATCAGATCATGTAGATTCAGTATCGATAAATTAAGCCATAGTGGCCATGGAAGCAGCACAATAACCTCTAGGTCTTTTAAAATGGGAATGAAAAAGGGATCTGAAGGACTGAAGTCTATCGGTCGATCACTTGCATCTGGGGTATCTAGGGCAGTGTTCCCGGAAGATCTTAAAGTTTCAGAAAAGAAAATATTTGACCCTCAAGACAATTTTTTGCTGTTATGGAATAAGCTTTTTGTTATCTCATGTATTTTGTCCGTGTCTGTTGATCCACTGTTTTTTTATCTCCCTGTCATAAATGATTCATTGATGTGTCTTGGTATAGACCAAAAGTTGGCAATTATAGTTACCACCTTGAGGACTGTTATCGATGCTTTCTATCTTCTACACATGGCTCTCCAATTTCGCACTGCTTATATTGCTCCATCATCTCGTGTTTTTGGACGGGGTGAACTTGTGATAGATCCGCCACAGATAGCCAAGCGATACTTGCAGCGGTATTTCATTATTGATTTCCTATCAGTGTTGCCATTACCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTACTAGCAACAAAGCAGGCCTTGCTGTTCATTATTTTACTTCAATACATTCCGAGATTCCTCCGGATGATACCATTGACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCAAATTATTTGCTCTTATTCATGCTTGCCAGCCATATAGTTGGATCATTTTGGTACTTGCTAGCTGTTGAACGCAACGACTCATGCTGGAAAAAGGCTTGTAAAGAATTGATTGGCACTGTGTGCAATAAAAACTTCTTGTATTGTGGCAACCAATACATGAGTGGTTATAGTGCCTGGCAGAATAAAAGTGAAGATATTCTCAAGTCTGAGTGCTCTGCAGATAATCCTGATGCACCTTTTGAATATGGAATATTCAAACAAGCCTTGTCATCTGGTATTGTTTCATCTAAGAAGTTCTTCTCCAAGTACTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAGGGACTTCAAACTAGCACCTATCCTGGAGAGGTTATCTTTTCAATCTCGCTAGCCATATCCGGCCTTATCCTCTTTGCACTTCTGATTGGTAACATGCAGACTTATCTTCAGTCTCTTACCATTAGGCTTGAGGAGATGAGAGTCAAAAGGCATGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCAACAGAGCTTAGAGAACGTGTGAGACGATATGATCAATATAAGTGGTTAGCAACACGTGGTGTAGATGAAGAAAGTTTGGTTCAGAGTCTACCAAAGGATCTCCGAAGAGACATTAAGCGTCACCTCTGTTTAGCTTTAGTGAGAAGGGTCCCACTATTTGAGAGTATGGATGAGAGATTGCTAGACGCCATATGCGAGAGACTGAAGCCATGTCTGTTTACAGAGAGTACTTACATTGTTCGGGAAGGAGATCCAGTCGATGAGATGCTTTTCATCATACGTGGTCGCCTTGAGAGTGTTACCACAGATGGTGGGAGGAGTGGATTTTTTAATCGCAGTTTTCTGAAAGAGGCTGACATCTGCGGTGAGGAGCTTTTAACATGGGCACTGGATCCCAAATCTGGGGCTAACCTTCCATCTTCTACTCGAACTGTTAAGGCTTTAACAGAGGTTGAGGGATTTGCTTTAATTGCCGATGAGTTAAAATTTGTTGCCAGTCAATTTAGGCGCCTTCACAGTAGACAGGTTCAACACACCTTCAGATTTTACTCCCAACAATGGAGGACTTGGGGTGCATGCTTTATTCAAGCAGCATGGCGTCGTTATACTAAAAGGAAAACTGCGGAACTTCATCGAATAGAAGAATCCAGGGAGTCAAAAGGAACTCTCAATAATGGCAGTGGTGGTTCATACAGTATCGGTGCAACCTTCTTGGCCTCAAGATTTGCAGCTAACGCTCTTCGTGGTGTACATCGCAATCGGAATAATGCTAAGATTGCCAAGGAGTTAGCGAAATTACAGAAGCCTCATGAGCCTGACTTTACTGCAGATGATGCACACTAA 2214 0.4241 MFDCGYKSQYMDGQREKFVRLDDFDSRLSSPSGAGIRSCRFSIDKLSHSGHGSSTITSRSFKMGMKKGSEGLKSIGRSLASGVSRAVFPEDLKVSEKKIFDPQDNFLLLWNKLFVISCILSVSVDPLFFYLPVINDSLMCLGIDQKLAIIVTTLRTVIDAFYLLHMALQFRTAYIAPSSRVFGRGELVIDPPQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKQALLFIILLQYIPRFLRMIPLTSELKRTAGVFAETAWAGAANYLLLFMLASHIVGSFWYLLAVERNDSCWKKACKELIGTVCNKNFLYCGNQYMSGYSAWQNKSEDILKSECSADNPDAPFEYGIFKQALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRHDSEQWMHHRLLPTELRERVRRYDQYKWLATRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADICGEELLTWALDPKSGANLPSSTRTVKALTEVEGFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWGACFIQAAWRRYTKRKTAELHRIEESRESKGTLNNGSGGSYSIGATFLASRFAANALRGVHRNRNNAKIAKELAKLQKPHEPDFTADDAH* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0286 737 Pfam Ion transport protein 109 435 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan15g0286 737 Gene3D - 114 434 - -
Lan15g0286 737 SUPERFAMILY Voltage-gated potassium channels 101 431 - -
Lan15g0286 737 ProSiteProfiles cAMP/cGMP binding motif profile. 509 591 IPR000595 -
Lan15g0286 737 Gene3D Jelly Rolls 507 627 IPR014710 -
Lan15g0286 737 SMART cnmp_10 509 640 IPR000595 -
Lan15g0286 737 CDD CAP_ED 509 640 IPR000595 -
Lan15g0286 737 SUPERFAMILY cAMP-binding domain-like 439 626 IPR018490 -
Lan15g0286 737 Gene3D Helix hairpin bin 437 500 - -
Lan15g0286 737 PRINTS EAG/ELK/ERG potassium channel family signature 166 175 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0286 737 PRINTS EAG/ELK/ERG potassium channel family signature 378 395 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0286 737 PRINTS EAG/ELK/ERG potassium channel family signature 404 415 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0286 737 PRINTS EAG/ELK/ERG potassium channel family signature 422 431 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0286 737 PRINTS EAG/ELK/ERG potassium channel family signature 472 479 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0286 737 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 734 - -
Lan15g0286 737 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0286 Lan-Chr15 3601910 3608948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0286 1 735 Ion Channels AT2G23980 75.000 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0286 K05391 - gmx:100820202 1278.85