Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0285 ATGGCGGAACTGGAACACTGCATCAAGGAAAATGAAAAAGAGGAAGAGATTGTGAAGGAACGAGTCAGTGACTCACCGCTTATTACTGAGTCGAATCATGGCGAGTTAGATAGTTTCAGTACTCATCATGAAGTGGGGCCCAATTTAGAAACCCTAGTTGTTGTTTTACCTTCTTCTTCTTCTTCTGTCTTGCTTGATCGTAGTGATGATTTGCAAGGAAGAGTTAAAATTGATAACGCTGGCGAAGCAGAGAATAAGCAGCCAGTTGGACCTACTGATGAACAAATTATTGTAGAAGAAGTTGAGGCACCTCAAGTATCTACAGAAAATCAACCTCGGGTCGTTGTGTGTTCAAGTCCGTTGTCTGAACTTTCACCAACTTCTATTGCACAGTCTTTATCGTCTGCCGCTAGTCCAACTTTACCAGAACAGAGGCTCTTACCTCCTAAGGTCAATAGTGCACATATGACACAAGTTGAAAGAAAAACTCCTAAAGGTGGCAAAACCTCGCCTTCTGTTTCTGCTGCAAGGACATCTGCGCCGGATGGATACAACTGGCGTAAGTATGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTAGAAGCTATTACAGGTGCACCCATTCAGATTGTTCTGCAAAGAAGATTGAATTCTGTGACCATTCAGGTCAGGTGATATCGGTTGTTTATAAAAGTCAACATAGCCATGATCCACCGCAGAAGACTAATTTCGGTAGGGAAAGTAAGTTCTTGCCTTCCAGTGAAGCCTTTGTAGAAAACAGTGTTCCGGAGCAGCCTATTGTAGTTGTAAATGATTCTGGTCCATCCTCTTCATCAAGAGAACCTAAACAAGAAGTACCTTGTAGTGCTGGTGCTGATAAGAAACAACAAAACTCATCTAACAGTGAGAATGGTAAAGTTATTTTGAAGGGGGAAGACGCTAATGAATTTGAGCTGAAAAGAAGAATGAAGATAGATGATTTAACAAGCTTGGAGACACCAGTAAAACCTGGAAAGAAACCCAAGCTTGTTGTACATACGGCAGCGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAAAAAATGGTGAAGGGGAATCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCATATTGAGACTGCTCGAGATAACTCAAACGCAGCCATCATAACATACAAGGGAGTACATGACCATGACATGCCTGTGCCCAAGAAACGACACGGCCCTCCATGTGCACCACTCGTGGCTGCTGCAGCACCTGCTTCAATGAACAATTTGAAGTCCACGAAAACTGACTCACTACAAAATCAGAAAACTTCTACCCGATGGTCAGTTGACACAGAAGGAGAATTAACCGGGGAAGCCTTGGACCTTGGCGGTGAGAAAGCAATAGAGTCGGCTCGAACTCTTCTGAGCATAGGCTTTGAAATTAAACCTTGCTGA 1482 0.4386 MAELEHCIKENEKEEEIVKERVSDSPLITESNHGELDSFSTHHEVGPNLETLVVVLPSSSSSVLLDRSDDLQGRVKIDNAGEAENKQPVGPTDEQIIVEEVEAPQVSTENQPRVVVCSSPLSELSPTSIAQSLSSAASPTLPEQRLLPPKVNSAHMTQVERKTPKGGKTSPSVSAARTSAPDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCSAKKIEFCDHSGQVISVVYKSQHSHDPPQKTNFGRESKFLPSSEAFVENSVPEQPIVVVNDSGPSSSSREPKQEVPCSAGADKKQQNSSNSENGKVILKGEDANEFELKRRMKIDDLTSLETPVKPGKKPKLVVHTAADVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETARDNSNAAIITYKGVHDHDMPVPKKRHGPPCAPLVAAAAPASMNNLKSTKTDSLQNQKTSTRWSVDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0285 493 ProSiteProfiles WRKY domain profile. 175 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 ProSiteProfiles WRKY domain profile. 349 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 MobiDBLite consensus disorder prediction 291 306 - -
Lan15g0285 493 Pfam WRKY DNA -binding domain 356 411 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 MobiDBLite consensus disorder prediction 1 43 - -
Lan15g0285 493 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 13 491 - -
Lan15g0285 493 MobiDBLite consensus disorder prediction 1 23 - -
Lan15g0285 493 Gene3D WRKY domain 168 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 Gene3D WRKY domain 339 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 SUPERFAMILY WRKY DNA-binding domain 178 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 491 IPR044810 GO:0003700
Lan15g0285 493 MobiDBLite consensus disorder prediction 262 309 - -
Lan15g0285 493 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 SMART WRKY_cls 354 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 SUPERFAMILY WRKY DNA-binding domain 346 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0285 493 MobiDBLite consensus disorder prediction 156 179 - -
Lan15g0285 493 MobiDBLite consensus disorder prediction 262 284 - -
Lan15g0285 493 MobiDBLite consensus disorder prediction 133 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0285 Lan-Chr15 3587381 3592173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0285 119 493 WRKY Transcription Factor Family AT4G30935 53.947 2.76e-120 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan15g0285 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0285 - - gmx:100127377 603.208