Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0254 AATCATCTGTTAGTTTTTAATGTATTTGTTTTATTGCCCCTTTTTTATCTTGCAGGAACATATATTGACAAGAAGTGCCCCTTCACTGGCAATGTTTCCATCCGGGGACGTATCATAGCTGGTACTTGTCACAGCGCTAAGATGACAAGGACTATTATTGTGAGGAGGAATTATCTTCATTATATTAAGAAGTATCAGAGATATGAGAAGAGGCATTCGAACATTCCTGCTCATGTATCACCTTGCTTCCGTGTGAAGGAAGGAGATCATGTCATTATTGGCCAATGCAGACCCATCTCAAAGACAGTGAGGTTCAATGTGTTGAAAGTGATCCCAGCAGGATCCTCCACTGGTGCGAAGAAGGCGTTCGCCGGACTTTGA 381 0.4226 NHLLVFNVFVLLPLFYLAGTYIDKKCPFTGNVSIRGRIIAGTCHSAKMTRTIIVRRNYLHYIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPISKTVRFNVLKVIPAGSSTGAKKAFAGL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0254 126 TIGRFAM uS17_arch: ribosomal protein uS17 23 110 IPR028333 -
Lan15g0254 126 SUPERFAMILY Nucleic acid-binding proteins 35 114 IPR012340 -
Lan15g0254 126 Pfam Ribosomal protein S17 41 109 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan15g0254 126 Gene3D - 12 125 - -
Lan15g0254 126 Pfam Ribosomal_S17 N-terminal 18 39 IPR032440 -
Lan15g0254 126 ProSitePatterns Ribosomal protein S17 signature. 88 100 IPR019979 GO:0003735|GO:0005840|GO:0006412
Lan15g0254 126 PANTHER BNAA06G38660D PROTEIN 18 125 - -
Lan15g0254 126 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 18 125 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan15g0254 126 PRINTS Ribosomal protein S17 family signature 55 78 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan15g0254 126 PRINTS Ribosomal protein S17 family signature 88 98 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan15g0254 126 PRINTS Ribosomal protein S17 family signature 98 105 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0254 Lan-Chr15 2887157 2888018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0254 13 126 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 83.333 4.23e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0254 K02949 - gmx:100500186 218.009