Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0244 ATGCACCCAGTTTCTGGATCCATAACTCTTCATTCTTCACTATGCACATTCTCTTCTGATAAACCATCATCATCATCTTCTTCTTCTTCTAGATCAACCAACAATCTCTCTGTTGCTTCCAAACCCAAAACACTTCTCCAAAACCACCCACTTTATACACCCATCAATGCAAAACTCTCCATTCAATTCAAAGAAAAAATCTTGTGTCTTGAGATATTGGGCATTGATGCAGGTAAAGCATTGTCCCAAAACCTTGAACTTCATGCAGCTACAATGGAATCCATTCATTCCATTATCTCATTCCTTTTATCCAAAGGTATCCATCAAAAAGACTTGCCTAGGATATTTGGCATGTGTCCAAAGATTCTAACTTCAAATATCAAAACTGATCTTAACCCAGTTTTTGATTTTCTCTTACAAGAACTTAATGTCCCAGATCATAGCTTTAGAAGGGTTGTTAAAAAGAACCCAAGATTGCTTACTTCAAGTGTTATGGATCAGCTTAAACCAGCTTTGTTCTACCTTAAGAGACTTGGGTTCAAGGATTTGGAAGCATTGGCTTATCAAGATTCTATTTTGTTGGTGTCTAATGTTGAAGGGACTCTTATTCCTAAGCTAAAGTATTTGGAAAGTTTGGGATTTTCTAAAGATGAGGCTAGGATTATGGTTTTAAGATGTCCATCATTGTTCACTTTCAGCATTGAAAATAATTTTCAACCAAAGTTTGAGTATTTTTCTGTTGAAATGGGTGGGAAATTGGAGGAACTGAAAGAATTTCCTCAGTACTTTGCTTTTAGTTTGGAGAAAAGAATAAAGCCTAGACATTTGGAGGTTGTGCAAAGTGGAATTCAATTACCTTTGTCAGTGATGCTTAAAAGTACTGATGAAGCTTTTGTGGAGCTGATAAATCAAGTAGGTGGATGA 924 0.3615 MHPVSGSITLHSSLCTFSSDKPSSSSSSSSRSTNNLSVASKPKTLLQNHPLYTPINAKLSIQFKEKILCLEILGIDAGKALSQNLELHAATMESIHSIISFLLSKGIHQKDLPRIFGMCPKILTSNIKTDLNPVFDFLLQELNVPDHSFRRVVKKNPRLLTSSVMDQLKPALFYLKRLGFKDLEALAYQDSILLVSNVEGTLIPKLKYLESLGFSKDEARIMVLRCPSLFTFSIENNFQPKFEYFSVEMGGKLEELKEFPQYFAFSLEKRIKPRHLEVVQSGIQLPLSVMLKSTDEAFVELINQVGG* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0244 307 Gene3D Transcription termination factor 3, mitochondrial 80 305 IPR038538 -
Lan15g0244 307 MobiDBLite consensus disorder prediction 17 36 - -
Lan15g0244 307 SMART mt_12 184 215 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 SMART mt_12 113 145 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 SMART mt_12 220 252 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 Pfam mTERF 84 183 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 Pfam mTERF 193 298 IPR003690 GO:0003690|GO:0006355
Lan15g0244 307 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 304 - -
Lan15g0244 307 PANTHER CGI-12 PROTEIN-RELATED 14 304 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0244 Lan-Chr15 2740300 2741520 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan15g0244 mTERF 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0244 K15032 - gmx:100788221 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0244 15 2740300 2741520 Lan14g0047 14 738910 740106 LSH