Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0217 ATGGCAACTGATCTTAACTCGGGGTTGTCGAAGAAAACATTTGTTTTTGGATTGAAAGTATGGGTATTAATGGGAATAATAGTTGGCTTGTTCATTACAACTATTCTTGTTGTGCTAACTATATGTCTCACTTTAAGAAAGAAATCCAGAACAGCCAATGGCAAGCTTCCTCTTAGCCATCCTTTATCCGTTTCCGAAGAGATCAAAGAAATTAGAGTTGATCAAATTTCAGCAAATAATCTTCCACAGAAGGGTGCTTTTATGAGTCTGAGTGAAAAATATATTGATAGGGAGTCTGAACAGGTTTCAATCCATACGAATAATGGGGATAATACTAGTCAATCAGGCTCCTTTAATCATTTAGAAAACGATGTTAATGGCTCACAATCAGGTGAAGAAAGCAGTGTTAAGAATATTTCATACAGGTCCTCTTCGCATTCTATAACTGCACCATCCCCTTTGTGTGGTCTACCTGAGTTCTCTCACCTCGGCTGGGGGCAGTGGTTTACGTTAAGGGACCTAGAACTTGCAACAAATAGATTTTCGAAAGACAATGTTATTGGTGAAGGCGGATATGGAATTGTTTTCCGAGGTCAGTTAATCAATGGAAATATTGTGGCCATTAAGAAGCTCCTCAATAATATAGGACAAGCTGAAAAGGAATTTAAGGTGGAAGTTGAGGCTATAGGTCATGTGCGACATAAGAACTTGGTTCGACTCTTGGGCTATTGCATTGAAGGCACTCACAGGTTGCTGGTTTATGAGTATGTTAACAACGGCAACTTAGAGCAATGGCTTCATGGAGCCATGCGGCAACATGGCTTTCTTACTTGGGATGCTAGGATGAAAGTTCTCCGTGGAACAGCCAAAGCGTTGGCTTACTTGCATGAGGCGATTGAGCCAAAAGTTGTGCATAGAGATATTAAGTCGAGCAATATTCTAATCGATGATGACTTTAATGCCAAAATATCTGACTTCGGTCTTGCTAAGTTACTAGGCGCTGGAAAAAGTCATGTTACAACTAGAGTAATGGGTACTTTTGGATATGTAGCTCCCGAGTATGCCAATTCTGGCTTGCTGAACGAGAAGAGTGATGTTTATAGCTTTGGGGTATTGCTTCTTGAAGCAATTACAGGAAGAGACCCAGTGGATTATAGCCGACCGGCAGCTGAGGTAAATTTGGTCGACTGGCTCAAGATGATGGTAGGGAGTAGGCGCTCGGAAGAGGTGGTGGACCCTAACATTGACAATAGGCCATCAACAAGTGCCCTTAAACGATCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCGAAGATGAGTCAAGTTGTGCGTATGCTTGAGTCGGAGGAATATCCCATACCTCGAGAGGATCGAAGACGCAAAAGGAGTCTGACAGGAAACACGGAGGTGGAGGTTCAGAAGGATACTTCTGATAGAGATAAGAGTGACAATCCAGATTATAAGTCCAATGCCAGAAGGAACCAAAGGAACAGAAGCGAGCCGACAATTTTTGCATTCTTTTGA 1542 0.4202 MATDLNSGLSKKTFVFGLKVWVLMGIIVGLFITTILVVLTICLTLRKKSRTANGKLPLSHPLSVSEEIKEIRVDQISANNLPQKGAFMSLSEKYIDRESEQVSIHTNNGDNTSQSGSFNHLENDVNGSQSGEESSVKNISYRSSSHSITAPSPLCGLPEFSHLGWGQWFTLRDLELATNRFSKDNVIGEGGYGIVFRGQLINGNIVAIKKLLNNIGQAEKEFKVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQHGFLTWDARMKVLRGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGSRRSEEVVDPNIDNRPSTSALKRSLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRKRSLTGNTEVEVQKDTSDRDKSDNPDYKSNARRNQRNRSEPTIFAFF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0217 513 PANTHER OS01G0323000 PROTEIN 2 502 - -
Lan15g0217 513 Pfam Protein kinase domain 182 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0217 513 PANTHER RECEPTOR-LIKE KINASE PLANT 2 502 - -
Lan15g0217 513 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Lan15g0217 513 Gene3D Phosphorylase Kinase; domain 1 162 256 - -
Lan15g0217 513 MobiDBLite consensus disorder prediction 104 138 - -
Lan15g0217 513 MobiDBLite consensus disorder prediction 457 508 - -
Lan15g0217 513 SMART serkin_6 181 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0217 513 CDD STKc_IRAK 187 453 - -
Lan15g0217 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Lan15g0217 513 Gene3D Transferase(Phosphotransferase) domain 1 257 469 - -
Lan15g0217 513 ProSiteProfiles Protein kinase domain profile. 181 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0217 513 SUPERFAMILY Protein kinase-like (PK-like) 165 460 IPR011009 -
Lan15g0217 513 MobiDBLite consensus disorder prediction 457 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0217 Lan-Chr15 2348721 2352686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0217 158 455 Trihelix Transcription Factor Family AT1G70460 50.165 3.07e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan15g0217 Pkinase 1.4e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0925 12 16158750 16163968 Lan15g0217 15 2348721 2352686 PCT
Lan1g1345 1 23151555 23156222 Lan15g0217 15 2348721 2352686 PCT
Lan15g0217 15 2348721 2352686 Lan12g0925 12 16158750 16163968 PCT
Lan15g0217 15 2348721 2352686 Lan1g1345 1 23151555 23156222 PCT