Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0214 ATGGTGATCTTAAACCTTGGGTGGAAAAAGGAGAAGGGAAAGGAAGAGAAGAGAATGCAACTTGGGAAATATGAATTGGGTGAGACACTTGGAGAAGGAAATTTTGGAAAAGTGAAGTTGGCTAAGGACACTTATACAGGGCAATTTTTTGCTGTTAAGATTCTTGAGAAGACCAAGATCATTGATCTCCATAACACTGATCAGATAAAGAGGGAAATAGCAACCTTGAAGGTTCTCAAGCATCCCAATGTTGTTAGATTATACGAGGTCTTAGCTAGTAAAACCAAAATTTATATGGTACTAGAGTATGTTACTGGAGGAGAGTTATTTGACAAAATTCAATCCAAGGGTAAACTAACAGAAGCTGCAGCAAGGAAAATATTTCAACATTTGATTGATGGTGTAAGCTATTGTCACAATAAAGGGGTCTACCACAGGGATCTTAAGCTAGAGAATGTACTTGTGGATGCCAAAGGGAACATAAAAATAACAGATTTTAACCTCAGTGCCTTACCCCAGAATTTTAGGGCTGATGGGTTGTTGCATACAACATGTGGAAGTCCTAACTATGTTGCACCTGAGATTCTTGCCAATCGAGGCTACGACGGCTCGACGTCGGATACATGGTCATGTGGTGTTATCTTGTATGTAATTCTCACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTATATCAGAAGATTTTTAAAGGAGATGTTCAGATACCAAAATGGTTATCATCTGGTGCACAAAAGATGATAAAGAGGATTCTTGATCCGAATCCGAAAACCCGAATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGAAGGGCTATACTCCAGTAAACCCTGAGGATGATGAAGAAGATGTATATATTGATGATGAAGAAGCCCTTTCCATCCATGAAGTGACACTTGAATCAGAACAAAGGAGTCCAGAATCACCAACACTTATCAATGCATTTCAGTTGATAGGAATGTCTTCATGCCTAGACCTCTCTGGTTTCTTTGAGAAAGAGGATGTATCTGAAAGGAAGATAAGATTTACATCCCACCATTCACCAAAAGATTTGATTGAAAGAATTGAGGACATTGTAACAGAAATGGGATTTATAGTCCAAAAGAGAAATGGAATGCTGAAAGTGACACAAGAGAACGAAAAACAGAAAAGTCTATGTAGTCTCTCAGCCGCAGCCGAGGTGTTTGAAATAAGCGCATCTTTGTATGTAGTAGAACTAAGGAAGTCTTATGGAGATCCTACAGTATATAGACAGCTATGCAAAAAGTTATCAAATGATTTGGGTGTTCCTCCAAAGCAAGTAGGAAGCTCAGAAATGATTGGATTAAGAGAAGAAAATTTAGAAGTGAGATAA 1386 0.3824 MVILNLGWKKEKGKEEKRMQLGKYELGETLGEGNFGKVKLAKDTYTGQFFAVKILEKTKIIDLHNTDQIKREIATLKVLKHPNVVRLYEVLASKTKIYMVLEYVTGGELFDKIQSKGKLTEAAARKIFQHLIDGVSYCHNKGVYHRDLKLENVLVDAKGNIKITDFNLSALPQNFRADGLLHTTCGSPNYVAPEILANRGYDGSTSDTWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPKWLSSGAQKMIKRILDPNPKTRITMAMIKEDEWFKKGYTPVNPEDDEEDVYIDDEEALSIHEVTLESEQRSPESPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSHHSPKDLIERIEDIVTEMGFIVQKRNGMLKVTQENEKQKSLCSLSAAAEVFEISASLYVVELRKSYGDPTVYRQLCKKLSNDLGVPPKQVGSSEMIGLREENLEVR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0214 461 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Lan15g0214 461 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Lan15g0214 461 Pfam NAF domain 320 379 IPR004041 GO:0007165
Lan15g0214 461 CDD CIPK_C 324 435 - -
Lan15g0214 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lan15g0214 461 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0214 461 Gene3D Kinase associated domain 1, KA1 317 440 - -
Lan15g0214 461 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Lan15g0214 461 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0214 461 Gene3D Transferase(Phosphotransferase) domain 1 104 285 - -
Lan15g0214 461 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Lan15g0214 461 PANTHER CBL-INTERACTING PROTEIN KINASE 21 12 444 - -
Lan15g0214 461 PANTHER - 12 444 - -
Lan15g0214 461 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0214 Lan-Chr15 2317940 2324474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0214 87 444 CBL-interacting serine-threonine protein kinases AT3G17510 69.359 6.09e-174 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan15g0214 Pkinase 1.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0214 K07198 - gmx:100815660 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0214 15 2317940 2324474 Lan14g0078 14 1088998 1095379 LSH
Lan12g0929 12 16196361 16202891 Lan15g0214 15 2317940 2324474 PCT
Lan1g1344 1 23135527 23140526 Lan15g0214 15 2317940 2324474 PCT
Lan15g0214 15 2317940 2324474 Lan12g0929 12 16196361 16202891 PCT
Lan15g0214 15 2317940 2324474 Lan1g1344 1 23135527 23140526 PCT