Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0210 ATGGATGGTATCATTCTGAAGCCAAAGGTAGAACAGGTCACTGAAGATGAACAGAAAGTTCAGGTTTTGGGCATAGATTCCATAGAATCATCTCCTCTTGTTGTGAAGAATCATGAAGATTTTGTTGATGGAGTTAGTACCAACTTGGAGAAAGAACTAATCCATAACAAGTCAATGCCAGAATCTGGAATGAATGCAGTGATTCCTAGTACAAGTCAGCTTACCATCTTCTATAATGGGAGCATTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCCGCCAAGTCTTCTGAAATGAAGAAAATCGGGACACAGTTTCCCGTCATTTCACCCGTTCCCACAAGGCCTTCTTCTCCACATGAAACCCCGAACAATGTTGCTCCCCCACAGGCACCCTGTTTCACTGCAGAGAAGAGTCCCATATGCAGGCTGCAAGGTGAATTCCCAATTGCACGCAGACATTCGCTTCAAAGGTTTCTTGAGAGGCGCCGAGACAGGCTGGGAAGCAAAGCCCCATATCCTATCTCATCAAAAGGAAAAGTGGCTGACAACATGGAGAATAACTTCTGTGCCGACAATGCAACCGATTTGGTTGCGATGAACCGATCCGAGGAGGAGTTTCAGCCAACAATCACTGCCTCTTGA 675 0.4533 MDGIILKPKVEQVTEDEQKVQVLGIDSIESSPLVVKNHEDFVDGVSTNLEKELIHNKSMPESGMNAVIPSTSQLTIFYNGSICVYDGIPAEKVHEIMLIAAAAAKSSEMKKIGTQFPVISPVPTRPSSPHETPNNVAPPQAPCFTAEKSPICRLQGEFPIARRHSLQRFLERRRDRLGSKAPYPISSKGKVADNMENNFCADNATDLVAMNRSEEEFQPTITAS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0210 224 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 57 200 IPR040390 -
Lan15g0210 224 SMART tify_2 67 102 IPR010399 -
Lan15g0210 224 Pfam tify domain 69 101 IPR010399 -
Lan15g0210 224 ProSiteProfiles Tify domain profile. 67 102 IPR010399 -
Lan15g0210 224 Pfam Jas motif 159 183 IPR018467 -
Lan15g0210 224 PANTHER DIVERGENT CCT MOTIF PROTEIN 57 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0210 Lan-Chr15 2254191 2257757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0210 73 186 Tify Gene Family AT5G20900 52.632 1.93e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan15g0210 tify 9.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0210 K13464 - gmx:100306045 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1330 1 23022378 23025097 Lan15g0210 15 2254191 2257757 PCT
Lan15g0210 15 2254191 2257757 Lan1g1330 1 23022378 23025097 PCT