Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0208 ATGTTAAAAAAAGAACAACATTCTTGTCCTTTAAATATGCAAATAACAAGTATCTCTCAATGTATTTTCATTCCAATGGCTTTCTCTTCTATCACATTCATCTTATTCTTAGTTTTGTTTCTTTGCATGTGTCTTTCATTTGATGCTGATGCTAGTACTTATGATAATACAGTGAGATCAGAGTTTCTTAAAGTTTCTCCTTCTGAATTTGTTGGTTCTGTAAATGAAGTTGTTGATGTTTTGCAAGATGTTACTTCCATTCTCTCTGAGTTTGGCAATGATTTTGGAGATTTTCGGCTTTCAAATGCAGTTTCTGATTGTCTTGATTTGCTTGATTTGTCTTCTGATGAACTTAGTTGGTCTGTCTCAGCTACTCAGAGTCCCAAAGGCAAGCATAATAGTACTGGGAACCTAAGTTCAGATTTAAGGACATGGCTAAGTGCTTCACTAACAAATCCAGAGACATGCATGGATGGATTTGATGGTACAAACAACATTGTTAAGGGTCTAGTATCAAATGGTCTTGTCCAAGTTATATCATTGGTGCAACAACTTTTAACTCAAGTGAACCCTGTTATAGATAATTTCCCTTTCACAAATAAGGGTCAATTCCCTGGATGGGTTAAAGCAAGGGATAGAAAAAAGTTACTTGAAGAAAATGGGGTTGTTGTTGCGGATGCTATAGTAGCTAGTGATGGAAGTGGAAATTATACAAAGGTTATGGATGCTGTGAAAAAAGCACCTAACTATAGTATGAGAAGGTTTGTGATATATGTGAAAAAGGGTGTTTATAATGAGAATGTTGAGATTAAGAAGAAGAAATGGAATGTTATGATTATTGGAGATGGTATGAATGAAAGTGTGATAAGTGGAAATAGAAGTTTCATTGATGGTTGGACAACATTCAGAACAGCTACCTTTGCTGTTAGTGGCAGAGGATTCATAGCAAGAGACATTTCCTTCATCAACACTGCAGGGCCAGAAAAGCATCAAGCAGTAGCATTAAGATCAGATTCAGATCTTTCTGTGTTCTATAGATGTGGCATTTTTGGTTACCAAGATAGTCTCTATGCTCATACGATGCGCCAATTCTATCGAGAATGCAAAATCACGGGCACGGTTGATTTCATATTTGGTGATGCTACTGCTCTATTTCAGAATTGTCAAATACTTGCAAAGAAAGGGTTACCAAATCAAAAGAATACAATTACTGCTCATGGTAGAAAAGACCCTGGTGAACCGACCGGTTTTTCGATCCAATTCTGTAACATATCAGCAGATTCTGACCTTCGTCCGGTTGTTAATTCCACTCATACGTACCTCGGTAGGCCGTGGAAGTCGTATTCGCGAACAGTTTTCATGCAATCGTACATAACCGATGTGTTACGGCCCGAAGGGTGGTTAGAGTGGAATGGCGAATTCGCTTTGGATACATTGTATTATGCAGAGTATATGAATTATGGTCCGGGATCTGGACTAGGTGACCGCGTAAAATGGCCGGGGTACCATGTAATGAATGATACTAGACAAGCTAGTAACTTCACTGCAACACAATTTATTGATGGGAATCTATGGTTACCTTCTACTGGTGTAACATTTATTGCAGGATTGGGGGTTTAA 1620 0.3802 MLKKEQHSCPLNMQITSISQCIFIPMAFSSITFILFLVLFLCMCLSFDADASTYDNTVRSEFLKVSPSEFVGSVNEVVDVLQDVTSILSEFGNDFGDFRLSNAVSDCLDLLDLSSDELSWSVSATQSPKGKHNSTGNLSSDLRTWLSASLTNPETCMDGFDGTNNIVKGLVSNGLVQVISLVQQLLTQVNPVIDNFPFTNKGQFPGWVKARDRKKLLEENGVVVADAIVASDGSGNYTKVMDAVKKAPNYSMRRFVIYVKKGVYNENVEIKKKKWNVMIIGDGMNESVISGNRSFIDGWTTFRTATFAVSGRGFIARDISFINTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYAHTMRQFYRECKITGTVDFIFGDATALFQNCQILAKKGLPNQKNTITAHGRKDPGEPTGFSIQFCNISADSDLRPVVNSTHTYLGRPWKSYSRTVFMQSYITDVLRPEGWLEWNGEFALDTLYYAEYMNYGPGSGLGDRVKWPGYHVMNDTRQASNFTATQFIDGNLWLPSTGVTFIAGLGV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0208 539 SMART PMEI_2 53 188 IPR006501 GO:0004857
Lan15g0208 539 ProSitePatterns Pectinesterase signature 1. 251 270 IPR018040 -
Lan15g0208 539 Pfam Pectinesterase 226 523 IPR000070 GO:0030599|GO:0042545
Lan15g0208 539 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 64 537 - -
Lan15g0208 539 CDD PMEI-like_4 33 192 - -
Lan15g0208 539 PANTHER PECTINESTERASE 64 537 - -
Lan15g0208 539 Pfam Plant invertase/pectin methylesterase inhibitor 97 173 IPR006501 GO:0004857
Lan15g0208 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 183 IPR035513 -
Lan15g0208 539 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Lan15g0208 539 Gene3D - 221 537 IPR012334 -
Lan15g0208 539 SUPERFAMILY Pectin lyase-like 225 536 IPR011050 -
Lan15g0208 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 190 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0208 Lan-Chr15 2238902 2242814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0208 29 537 Carbohydrate Esterase AT3G43270 61.804 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0208 K01051 - gmx:100801813 791.186