Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0207 ATGCATCATTACTTAACAAAACACCTAACTCCAATGCCTACATTCTTATCCTTCTTTTTGGTACTACTCTTTCTTGGCCAATGCACCACTACAATTGATGTTGCTGGTGCCTATGGTGATGTAGGAATAGAGTGTTTAATGGTTTCCCCTTCTGAGTTTGTTGTTTCATTGAGAACTAGTGTTGATGTTTTAGAAGATGTTACATCAACTCTCTCTAATTTCACTTATTATTCTAGAAATGATCTTGGAGAGTTTCAGTTTTCTAATGCAATATCTGATTGCATGGAATTACTTGACTTGTCATCAGATCAACTCAGTTTGTCTATATCAGCTACTGAGAGTCCCCAAGGTCAAGTTTCAACCCAACATGTCCATTTTCCTTCTTGGGTTGAACCACATGACCAGAATCTTTTACAAACTGGTGAGGTTGCTGTAGATGTTGTAGTAGCTGCTGATGGGTCAGGGAACTATAAAACTGTGATGGAAGCAGTGAATGCAGCACCTGAATATAGCATGAGAAGATTTGTGGTGTTCATAAAAAAAGGGGTTTATATAGAGAATGTTGTTATTGATAAGAAGAAATGGAACCTTATGATTATTGGAGAGGGTATGGATGAGACTATTATCTCTGGTAGCTTGAGTAAAACTGTGAATTTGACTACATATAAGACAGCTACCTTTGCTACAAATGGTAGAGGATTCATAGCAAGAGACATTTCCTTCAAGAACACTGCAGGACCAGAAAAGAACCAAGCAGTAGCATTAAGATCAGATTCTGACCTATCAGTTTTCTACAGATGTGGCATTTTTGGTTACCAAGACACCCTCTATGCCCACACATTGCGCCAATTCTATAGAGAATGCAAAATCACTGGCACAGTTGATTTCATCTGTGGTAATGCCACTGCAGTGTTCCAAAACTGTCAAATACTTGCAAAGAAAGGCTTACAAGATCAAAAGAACACCATAACAGCTCAAAGTGCAAGATACCCAAATCAATCATCTTGTTTCTCTATCCAATTCTCAAACATTTCTGCTGATTATGACCTTCTACCATTCACTAAATCCATCAAAACTTACCTTGGAAGACCATGGAAAGCATATTCTAAAACAGTTTTCATGCAATCTTATATAAGTGATGTGTTGAGTCCAGAAGGGTGGTTAGAGTGGAATGGTAGCATATATTTGGATACATTGTACTATGCTGAGTATCAAAATTATGGACCAGGATCTGCATTAGATAAGAGAGTGAAATGGCCTGGGTATCATGTGTTGAATGATTCTAACCAAGCTAGTAACTTCACAGTTGCACAATTGATACATGGGGATCTGTGGTTACCTTTAACTGGTGTAAACTTCACTCTTGGGTTTTAG 1374 0.3792 MHHYLTKHLTPMPTFLSFFLVLLFLGQCTTTIDVAGAYGDVGIECLMVSPSEFVVSLRTSVDVLEDVTSTLSNFTYYSRNDLGEFQFSNAISDCMELLDLSSDQLSLSISATESPQGQVSTQHVHFPSWVEPHDQNLLQTGEVAVDVVVAADGSGNYKTVMEAVNAAPEYSMRRFVVFIKKGVYIENVVIDKKKWNLMIIGEGMDETIISGSLSKTVNLTTYKTATFATNGRGFIARDISFKNTAGPEKNQAVALRSDSDLSVFYRCGIFGYQDTLYAHTLRQFYRECKITGTVDFICGNATAVFQNCQILAKKGLQDQKNTITAQSARYPNQSSCFSIQFSNISADYDLLPFTKSIKTYLGRPWKAYSKTVFMQSYISDVLSPEGWLEWNGSIYLDTLYYAEYQNYGPGSALDKRVKWPGYHVLNDSNQASNFTVAQLIHGDLWLPLTGVNFTLGF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0207 457 Gene3D - 140 457 IPR012334 -
Lan15g0207 457 SUPERFAMILY Pectin lyase-like 143 456 IPR011050 -
Lan15g0207 457 Pfam Pectinesterase 146 443 IPR000070 GO:0030599|GO:0042545
Lan15g0207 457 PANTHER PECTINESTERASE 121 456 - -
Lan15g0207 457 PANTHER PECTINESTERASE 47 117 - -
Lan15g0207 457 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 47 117 - -
Lan15g0207 457 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 121 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0207 Lan-Chr15 2230354 2233935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0207 125 457 Carbohydrate Esterase AT3G43270 64.671 3.79e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0207 K01051 - gmx:100798620 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1325 1 22961574 22964450 Lan15g0207 15 2230354 2233935 PCT
Lan15g0207 15 2230354 2233935 Lan1g1325 1 22961574 22964450 PCT