Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0197 ATGTTGAATCCCCAACGCCTCAAAACTATACTCCATCTAAAGGGTTTAACCAGAATACTAATCCCAAACTTAAACCCTAATTTCCCAAACATTCTTTCAACAAATTCTCATAATTACAGCAAAATCACTTCAAATCAAAACTCATTCACGGTTTCCTACCTCATAAACAATTGTGGGTTTTCTCCTGAATCTGCTCTCATTGCTTCCAAGCAAGTCCATTTTGAAACAGCACAAAAGCCTGATTCTGTTATCACTTTCTTCAGAAACCATGGTTTCAACAAATCTCAGCTCTTTAGTATTATCAGAAAAGCACCAAATGTGCTCACTTCTGATCCCCACAAAAGGGTTTTGTCAAAGTTTGAATTTTTATACTCCAATGGTGCTTCGAGTTCTGACATTGTTCTATTGGTGAATAGGGACCCCAGGTTCTTGTATTCAAGCCTTGAGAACAGCATAATCCCTAGGTATGAATTTGTGAAAAGGTTTTTGAAATGTGATAAGAAAACAATTAAGTGTATTGTTGTTTGTCCTGGTTTACTTGGTAGATTTCTTATGGAAAAAAATGTCAATTTTTTGCTTGATGATGTTGGAGTGGCTGAGTCACATATTTGCTGCTTGCTTCAATCGAGGCCTTCGATACTCTTGTCGGATTTTAATCACTTGAAGGAGGCAGTAAATGAAGTAAAGGCAATGGGGTTTGATGATCCATCAAAAGTTACCTTTGTTATAGCATTGCTAGCCAGAAGGGCTATGTCGAAATCGCGGTGGGATGCCAAAGTTGAAGTCTTTAAGAGCTGGGGGTGGTCTGAAGAGAACGTTCTGGAAGCATTTAGGAAGGAGCCGAAATGTATGTTATCATCCAAGGATAAGATCAATGAGGTGATGAGACTTTGGGTGAGTCAGCTTGGTTGGAACTCTCTGGCCCTTGTCGATGGACCGGGGATGTTTGGATATAGTTTGGAGAAAAGGATCATTCCAAGGGCTTTCGTTGTCCAATATCTTCTCGCGAAAGGTTTGAGAAAAAAGAATGCTAGCTTATTTTCACCATTTGTTATTTCTGACAAGCTGTTTATTGAGAAATATGTTGAGAGTTTTAAGGAGGAAAGATCTGAACTATTGAAGTTATACCAGGAAAAACTGAATGTTCAAGATAGCAAGAGGATGGTGTAA 1170 0.3863 MLNPQRLKTILHLKGLTRILIPNLNPNFPNILSTNSHNYSKITSNQNSFTVSYLINNCGFSPESALIASKQVHFETAQKPDSVITFFRNHGFNKSQLFSIIRKAPNVLTSDPHKRVLSKFEFLYSNGASSSDIVLLVNRDPRFLYSSLENSIIPRYEFVKRFLKCDKKTIKCIVVCPGLLGRFLMEKNVNFLLDDVGVAESHICCLLQSRPSILLSDFNHLKEAVNEVKAMGFDDPSKVTFVIALLARRAMSKSRWDAKVEVFKSWGWSEENVLEAFRKEPKCMLSSKDKINEVMRLWVSQLGWNSLALVDGPGMFGYSLEKRIIPRAFVVQYLLAKGLRKKNASLFSPFVISDKLFIEKYVESFKEERSELLKLYQEKLNVQDSKRMV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0197 389 SMART mt_12 170 199 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 SMART mt_12 204 234 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 SMART mt_12 134 166 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 Gene3D Transcription termination factor 3, mitochondrial 185 375 IPR038538 -
Lan15g0197 389 Gene3D Transcription termination factor 3, mitochondrial 63 184 IPR038538 -
Lan15g0197 389 PANTHER CGI-12 PROTEIN-RELATED 23 382 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 23 382 - -
Lan15g0197 389 Pfam mTERF 85 248 IPR003690 GO:0003690|GO:0006355
Lan15g0197 389 Pfam mTERF 252 357 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0197 Lan-Chr15 2138997 2142513 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan15g0197 mTERF 6.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0197 K15032 - gmx:102666739 394.815