Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0194 ATGGATGAGGGTGGAAGGTCCAAATTGAGTGGAATAAGGCAAATTGTTCGATTAAAGGAAATACTTCAGAAATGGCAAAATGTCACATTAACCTCAAAAACTTCTGATTCCAAAAAACCCTATTCTGATCCAAAAAGAACTTATTCTGATCTCAAAAGATCTAGTTCTGAACACAATTCTGCTATCACTTCTTCTGGAATATCACCAATAATTAACAGAAGGATCACAAATGTTATAGTTTGTGACTCAGATGAAGAGGGTTGTCAAAGCCCCGAACCACCACATGATGTTCCAAAAGGTTACTTAGCGGTCTATGTTGGACTAGAACTTCGGAGGTTCATTATTCCTACTAGCTACCTTAGCCATTCTTTGTTCAAAGTTTTGTTGGAAAAAGCTGAAGATGAATATGGGTTTGATCACAATGGAGGGCTCACAATTCCATGTGAGATTGAGACATTTAAGTACCTTCTCAAGTGCATAGAGAACAACCCATCTACCAACTCAGAAACTTTGGAAGAGTAA 522 0.3774 MDEGGRSKLSGIRQIVRLKEILQKWQNVTLTSKTSDSKKPYSDPKRTYSDLKRSSSEHNSAITSSGISPIINRRITNVIVCDSDEEGCQSPEPPHDVPKGYLAVYVGLELRRFIIPTSYLSHSLFKVLLEKAEDEYGFDHNGGLTIPCEIETFKYLLKCIENNPSTNSETLEE* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0194 173 Pfam Auxin responsive protein 83 160 IPR003676 GO:0009733
Lan15g0194 173 MobiDBLite consensus disorder prediction 38 53 - -
Lan15g0194 173 MobiDBLite consensus disorder prediction 33 63 - -
Lan15g0194 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 163 IPR003676 GO:0009733
Lan15g0194 173 PANTHER AUXIN-INDUCED PROTEIN 15A 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0194 Lan-Chr15 2116625 2119339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0194 1 168 Calmodulin-binding Proteins AT3G43120 63.314 1.48e-72 214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0194 15 2116625 2119339 Lan14g0095 14 1277970 1281181 LSH
Lan12g0952 12 16381886 16383834 Lan15g0194 15 2116625 2119339 PCT
Lan1g0454 1 3699717 3701699 Lan15g0194 15 2116625 2119339 PCT
Lan15g0194 15 2116625 2119339 Lan12g0952 12 16381886 16383834 PCT
Lan15g0194 15 2116625 2119339 Lan1g0454 1 3699717 3701699 PCT