Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0190 ATGAAGGCTCTTGCTCTTACCAATGGTTGTGTGTCTAATTCTGCTGAAGGGGAAAGGAAGAGAATCAATTCAGAGTTATGGCATGCTTGTGCCGGACCGTTGGTTTCTTTACCTCCTGTTGGAAGTCTTGTGGTTTATTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCCGACTTCGTACCGAGTTACCCAAATCTTCCGTCCAAGTTGATTTGCATGCTTCACAATGTTGCCTTGCATGCTGATCTTGAAACAGATGAGGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAAGAAGCAATGCTGGCATCAGACATGGGTCTCAAACAAAACCAACAACCTACCGAGTTCTTTTGCAAAACTCTTACAGCAAGTGACACTAGCACTCATGGTGGATTTTCTGTGCCTCGTAGAGCAGCTGAGAAAATGTTCCCACCTCTGGATTTTTCAATGCAACCTCCAGCTCAGGAAATTGTTGCCAAAGATTTGCATGACAATACATGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTATTGACTACTGGTTGGAGTGTCTTTGTAAGCACAAAAAGACTATTTGCTGGAGATTCTGTTCTTTTTATCAGGGATGAAAAACAGCAACTTCTTCTAGGTATAAAGCGTGCAAATAGACAGCAGCCGGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCACATTGGCATTCTTGCTGCTGCAGCTCATGCCGCTTCAAATAATAGCCCGTTTACTATATTTTATAATCCAAGGGCCAGCCCCTCGGAATTTGTGATTCCATCGGCCAAGTATAATAAGGCCTTGTACACTCAAGTTTCTCTTGGAATGAGATTTAGAATGATGTTTGAGACTGAGGATTCTGGAGTGCGCAGATATATGGGTACTATCACTGGAATCAGTGACTTAGATCCTGTTAGATGGAAGAATTCACAATGGCGCAACCTTCAGGTTGGATGGGATGAATCAACAGCGGGTGAACGCCCAAGCAGAGTTTCGATTTGGGATATTGAACCAGTAGTGACCCCTTTCTACATTTGTCCACCTCCTTTTTTTAGGCCGAAGTTCCCTAAGCAACCAGGAATGCCAGAAGATGAGTCTGATATTGAAAATGCTTTCAAGAGGGCTATGCCTTGGCTTGGAGATGACCTTGGCGTGAAGGATGCCTCAAGTTCATTATTTCCCGGTTTGAGCTTAGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTCAATCCTGCTCAATCAGGTTATTTCCCTCAGTCAATGATTTCATCTAATACCCTCCACGGTAACCTTAACACTGATGATCCATCCAAGTTATTGAACTTCCAAGCCCCACCAAGTCTTCAATTTAACAAACCGAACCTATCGAATCTAGTCAACCAATTGCAACAATCCCCAACATCATGGCCACAACAGCAACAGCAGCAGAAGATGCAGTCGTTGATGCAAACGCCGATGAACCAGCAGCAGCAACAGCAGCAGAGTCAACAACAGCTTCTGGAACCACAAAACGTTCCACAGCAACAGCAACAACAGCCCCAACTGTCTCAACAGAGAGCTCAGCAGCTGCAACAACAGCAACAGTTGTCTCAGCAGTCCATTATGAATAACGGGGCAATTACTTCTAACCAAATTCCAAATCAGTGTATGCAGCAACAAGTACCGTTCTCTCAGCTTCAGCAACAGCAATTACTCTCAAGCAATATCTCACCCCAACGAAGTATCCAATCAGCCAGCAAAAACACGTTGCTATTGACATCCGTACCGCAAGACTCGCAATATCAGCAACAGATAGATCAGCAAGCTAGTCTTTTACAGAGGCAGCAGCAGCAACAGACACAGTTGCAACAATCTTCATTGCACTTATTGCAACAAAGCATGTCACAGAGGGCATCACAGCAACCACAAGTTACATCAATGTCACAGCAAAACCCCTCGGAGCAACAACTACAATTGCAGTTGCTACAGAAATTGCAGCAGCAGCAACAACAACAACAACAACAGTTTCTACAGCAACAACATCAGCAGCAGCAAAATCTTCATCAACAAAATCAGAAGTTACCACAGCTTCCTCTATCACCGCATCAGTCTCAACAACTTGGCAACAATGCTTTCTCAATGGAGAAGCTTCTCAACAACAACAACAACTTCTCTTCTTCAGCTCTGATGCAATCACAACAACTTCCTGTGAACCAATCCATGAATACACAGAAATCACTTACGAATGTTCGAGGTCCATCCAGTCTTACAGATGCAGAAGCTCCGTCGTGCTCAACTTCACCATCTACTAACAACTGCCAAATATCTCCACCAAACCTTCTGAAGAGAAATCATCAAGTACCATCCACATTAGGGGGAGCTTCAGTAGTGGAGCCCACAAGTAATCTGATACAAGAGCTTCACTGTAAGCCTGACATTCAAATCAAACATGAATTATCCGGCATGAAAGGACCTGACCAGCTAAAATATAAGGGGACAATTGGTGATCAGCTGGAAGCTTCTTCTTCGGGAACATCTTACTGTATCGATCCGGCTAACATCCACCAGAACTTCCAACTCCCTAACTTCTGCATGGATGGGGATGTCCAATCACACCCTAGAAGCAATATACCATTTGCCTCGAATCTTGATGGATTAACACCGGATACTTTTCTCTCAAGAGGGTATGATTCTCAAAAAGATCTCCATAACTTGTTGAATCATTATGGTAGTGCTCCAAGAGACATTCAAACTGAGCTGTCCACAGCTGACATCAGTCCCGAATCATTTGGGGTGCCAAACATGCCTTTTAAGCCTGGTTGCTCAAATGATATGGCAATCAATGATACTGGGATTTTGAATAATGGCCCGTGGGCTAACCAGACTCAACGAATGCGAACATATACTAAGGTTCAAAAAGTTGGCTCTGTTGGAAGATGTATTGATGTCACTCGTTACAAAGGATACGATGAACTTCGGCATGATTTAGCTCGCATGTTTGGGATTGAAGGGCAACTTGAAGATCCTCAAAGGACGGAGTGGAAACTAGTATATGTGGATCATGAAAACGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTTAGCTGTGTCCTGAGCATAAAGATATTGTCATCTGCTGAGGTGCAGCAAATGAGCTTGGATGGGGATTTAGGAGGACATGTTCCAATCTCCAATCAAACTTGTAGTGGCACAGAAAGTGGCATTGCATGGAGGGGACAGTATGATGATAACTCTGCAGGCTCATTTAATAGATAA 3327 0.4364 MKALALTNGCVSNSAEGERKRINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVALHADLETDEVYAQMTLQPVNKYDKEAMLASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKMFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESDIENAFKRAMPWLGDDLGVKDASSSLFPGLSLVQWMSMQQNNQFNPAQSGYFPQSMISSNTLHGNLNTDDPSKLLNFQAPPSLQFNKPNLSNLVNQLQQSPTSWPQQQQQQKMQSLMQTPMNQQQQQQQSQQQLLEPQNVPQQQQQQPQLSQQRAQQLQQQQQLSQQSIMNNGAITSNQIPNQCMQQQVPFSQLQQQQLLSSNISPQRSIQSASKNTLLLTSVPQDSQYQQQIDQQASLLQRQQQQQTQLQQSSLHLLQQSMSQRASQQPQVTSMSQQNPSEQQLQLQLLQKLQQQQQQQQQQFLQQQHQQQQNLHQQNQKLPQLPLSPHQSQQLGNNAFSMEKLLNNNNNFSSSALMQSQQLPVNQSMNTQKSLTNVRGPSSLTDAEAPSCSTSPSTNNCQISPPNLLKRNHQVPSTLGGASVVEPTSNLIQELHCKPDIQIKHELSGMKGPDQLKYKGTIGDQLEASSSGTSYCIDPANIHQNFQLPNFCMDGDVQSHPRSNIPFASNLDGLTPDTFLSRGYDSQKDLHNLLNHYGSAPRDIQTELSTADISPESFGVPNMPFKPGCSNDMAINDTGILNNGPWANQTQRMRTYTKVQKVGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVLSIKILSSAEVQQMSLDGDLGGHVPISNQTCSGTESGIAWRGQYDDNSAGSFNR* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0190 1108 MobiDBLite consensus disorder prediction 448 544 - -
Lan15g0190 1108 MobiDBLite consensus disorder prediction 759 799 - -
Lan15g0190 1108 MobiDBLite consensus disorder prediction 696 720 - -
Lan15g0190 1108 Gene3D - 125 229 IPR015300 -
Lan15g0190 1108 Pfam AUX/IAA family 977 1066 IPR033389 -
Lan15g0190 1108 Gene3D - 975 1069 - -
Lan15g0190 1108 SMART B3_2 128 230 IPR003340 GO:0003677
Lan15g0190 1108 PANTHER AUXIN RESPONSE FACTOR 19 7 1095 - -
Lan15g0190 1108 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 1095 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan15g0190 1108 Coils Coil 676 696 - -
Lan15g0190 1108 SUPERFAMILY CAD & PB1 domains 994 1057 - -
Lan15g0190 1108 Gene3D - 291 362 - -
Lan15g0190 1108 Pfam Auxin response factor 254 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan15g0190 1108 ProSiteProfiles PB1 domain profile. 980 1073 IPR000270 GO:0005515
Lan15g0190 1108 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Lan15g0190 1108 MobiDBLite consensus disorder prediction 644 666 - -
Lan15g0190 1108 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Lan15g0190 1108 CDD B3_DNA 127 219 IPR003340 GO:0003677
Lan15g0190 1108 SUPERFAMILY DNA-binding pseudobarrel domain 118 257 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0190 Lan-Chr15 2043693 2050653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0190 5 1108 B3 DNA Binding Superfamily AT1G19220 60.789 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan15g0190 AUX_IAA 1.3e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0190 K14486 - gmx:100804628 1599.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0190 15 2043693 2050653 Lan14g0101 14 1340724 1351366 LSH
Lan12g0957 12 16427281 16434584 Lan15g0190 15 2043693 2050653 PCT
Lan1g0446 1 3588196 3595697 Lan15g0190 15 2043693 2050653 PCT
Lan15g0190 15 2043693 2050653 Lan12g0957 12 16427281 16434584 PCT
Lan15g0190 15 2043693 2050653 Lan1g0446 1 3588196 3595697 PCT