Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan15g0188 | ATGTCTAGTTCATCGGAGTACTCTGAGTTTTCCGGCCAGAAGCCGGTGAAGTCGCCGGAGAAAACAAGTTTCTCTCATACTTGTAGTCTATTGAGTCAATACATGAAGGAAAAGGGTAGTTTTGGAGATCTTACCATTGAGATGACATGCAACAAAGAACAAATTGAGTCACCTGAGACATCTTGTCAATCTGCAACAACCATGAACTTGTTTCCTACCAAAGAAAATAACATAGCACCAAAGAACCTCACAGCTTTGGATTTGCTCTCTCCACAAGCTGCTTTTCGCCCGCATCTTCCGGCCGAAGAGATTCCAACCTTGACCAATTCTAGTGTAATTAAGCCAGTGAGCAAGGGATCTAAACCTGCACAGTTGACAATCTTTTATGCTGGACAAGTTATTGCATTCGATGATGTTCCGGCCGATAAAGCCAATGAGATAATGTCCTTTGCCAGCAAAGGAATCTCCCAAAGCCAGAACTATTCTGTTCAAACATACACTAGGAGCCAACCTTCATTCCCTCATAATTTAGTCAGAACTTCTGCTGATTCAATTGCTCCTAATGTGAATATCATCCCTAGTACTCGAGCCAATTCGATTCTTCAACACCCTCAACCATCATCTAGACCTGTTGTTTGTGATCTACCAATTGCTAGGAATGCTTCACTTCATAGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAGTAACAAATCACATTGAAGCTACTAATAAGCCAATTGAATCTAAGTCATGGCTTGGCTTGGGTGCAAAATCATCTCAATCCTATGAGCAACTATAG | 819 | 0.4164 | MSSSSEYSEFSGQKPVKSPEKTSFSHTCSLLSQYMKEKGSFGDLTIEMTCNKEQIESPETSCQSATTMNLFPTKENNIAPKNLTALDLLSPQAAFRPHLPAEEIPTLTNSSVIKPVSKGSKPAQLTIFYAGQVIAFDDVPADKANEIMSFASKGISQSQNYSVQTYTRSQPSFPHNLVRTSADSIAPNVNIIPSTRANSILQHPQPSSRPVVCDLPIARNASLHRFLEKRKDRIAAKAPYQVTNHIEATNKPIESKSWLGLGAKSSQSYEQL* | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan15g0188 | 272 | SMART | tify_2 | 118 | 153 | IPR010399 | - | |
Lan15g0188 | 272 | Pfam | Jas motif | 216 | 241 | IPR018467 | - | |
Lan15g0188 | 272 | PANTHER | PROTEIN TIFY 10A-LIKE | 17 | 267 | - | - | |
Lan15g0188 | 272 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 17 | 267 | IPR040390 | - | |
Lan15g0188 | 272 | ProSiteProfiles | Tify domain profile. | 118 | 153 | IPR010399 | - | |
Lan15g0188 | 272 | Pfam | tify domain | 121 | 152 | IPR010399 | - | |
Lan15g0188 | 272 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan15g0188 | Lan-Chr15 | 2014348 | 2016921 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan15g0188 | 1 | 264 | Tify Gene Family | AT1G19180 | 41.697 | 7.42e-51 | 166 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Tify | Lan15g0188 | tify | 1e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan15g0188 | K13464 | - | gmx:100801449 | 354.369 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan15g0188 | 15 | 2014348 | 2016921 | Lan14g0104 | 14 | 1376743 | 1379156 | LSH | |
Lan12g0959 | 12 | 16446447 | 16448923 | Lan15g0188 | 15 | 2014348 | 2016921 | PCT | |
Lan1g1316 | 1 | 22866242 | 22868277 | Lan15g0188 | 15 | 2014348 | 2016921 | PCT | |
Lan1g0443 | 1 | 3572478 | 3574732 | Lan15g0188 | 15 | 2014348 | 2016921 | PCT | |
Lan15g0188 | 15 | 2014348 | 2016921 | Lan12g0959 | 12 | 16446447 | 16448923 | PCT | |
Lan15g0188 | 15 | 2014348 | 2016921 | Lan1g1316 | 1 | 22866242 | 22868277 | PCT | |
Lan15g0188 | 15 | 2014348 | 2016921 | Lan1g0443 | 1 | 3572478 | 3574732 | PCT |