Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0185 ATGGCCGCTGTTCGCTTCTTCCCTATCTTATCCATCCTCATCCTCATTCTCATCCTCGCTCCGTTCGCGTTTGCAGCGTCCGAAACCGAGTCCCTATTGAGACTTAAACAGTCCTTTACCAATGCAGATACCTCTCTATCTTCATGGATTCCAAATGTGTCACCATGTGGAAACTGGATTGGTGTTGTTTGCTTCAAGAACATCATCACTGGTTTGCATCTATCAGATTTAGGTCTCTCTGGGAAAATTGACATTGATGCTCTCATGCAGATTCCAGGCCTACGTACTATAAGCTTTGTCAACAATTCTTTCTCTGGCCCGGTACCTGAATTCAACAAGCTCGGCGCGATTAAAGCGATATACTTAACAGATAACCAGTTTTCTGGTCCGATTCCTTTGGAATTTTTCGCACAATTAGGTTCTTTGAAAAAGGTTTGGTTCTCAAATAACAAATTTTCAGGGAACATACCTGATTCGTTAAACGAACTCGATCTTCTCAAAGAATTGCACCTTGAGAACAATGAGTTTTCGGGTAAAATACCATCACTCAAGCAACAATTTACATCATTTAGCGTCACCAATAACAAGTTGGAAGGTATGATACCTGAGAATTTGGTGAGTTATGGGGCTAATTCATTCACTGGGAATGAGAAGCTTTGTGGTAAGCCTTTGGATAGGGCTTGTGAATATTATACTTTGCCAGCTGAAGAAGAGGGTAGAGTATATCTTTCAGGTTTTGGTATTAAGGTTATTTTGATACTTGTGTTTGCGGCTATTGCGGCTTTGGTCTTCTTATCCATGAGGAATAAGAAGCAAAGTAAACATGATTTCAGCATTATCAGCAGGAGTAACAGCAGCATCGACGGGGATCAGGTACAAGTGCATGTACCAAGTTCAAAGAATAGCAATTCCTCGGAAAATAAAAGCAAAAAGGGTAGTAGCCATGGTGAGCACAAGAGTGAGACAAAGAGAGCATCCACCACAAGGGGTGGTAGCATGGGTGACCTTGTTATGGTGAATGATGAGAAGGGTGTGTTTGGTTTGGGAGATTTGATGAAAGCTGCAGCAGAGGTTCTCGGAAATGGCGGGTTGGGATCAGCATACAAGGCTGCAATGGCAAATGGGTTATCTGTGGTGGTTAAGAGGATGAGAGAGATGAATAAGATTGGAAGAGATGTGTTTGATGCTGAGATGAGACAGTTTGGGAGGATCAAACACACTAATATATTGACGCCTTTGGCTTACCATTATCGCAGAGAAGAGAAGCTTTTTGTCACAGAATATATGCCAAAAGGAAGCTTGTTATATGTCTTGCATGGTGACAGAGGAACGTGCCACGCTGATCTGAATTGGCCTACCCGTTTGAAGATTGTTAAAGGAATTGCACGAGGTTGCGGCTTCCTTTACAATGAATTTTCTAACTATGAACTGCCCCATGGAAATCTCAAGTCTAGCAATATTATGCTAAGTGATGATTATGAACCTCTACTAAGTGAATATGCCTTTTATCCACTAATCAACCCTGGTGCTGTGCAATCAATGTTTGCATACAAAACTACAGATTATACAGAATACCAAAAAGTATCACAGAAGACTGATGTTTATTGCCTCGGCATCATCATTCTCGAAATCATTACCGGAAAGTTCCCATCTCAGTATCATAGCAATGGGAAGGGTGGTATTGATGTTGTGCAATGGGTCTTCATGGCGATTTCTGAGAGAAGAGAAGAAGAATTGATTGATCCAGAGTTAAAAAACAGTACAAGTTCGCTCAATAACATGTTGCAGCTTCTCCAAATCGGGGCTGCTTGCATAGAAAGCAACCCCGAACAAAGAATTACAATGAAAGAAGCCATTAGAAGGATAGAGGAAATGCAAGTTTAA 1884 0.4135 MAAVRFFPILSILILILILAPFAFAASETESLLRLKQSFTNADTSLSSWIPNVSPCGNWIGVVCFKNIITGLHLSDLGLSGKIDIDALMQIPGLRTISFVNNSFSGPVPEFNKLGAIKAIYLTDNQFSGPIPLEFFAQLGSLKKVWFSNNKFSGNIPDSLNELDLLKELHLENNEFSGKIPSLKQQFTSFSVTNNKLEGMIPENLVSYGANSFTGNEKLCGKPLDRACEYYTLPAEEEGRVYLSGFGIKVILILVFAAIAALVFLSMRNKKQSKHDFSIISRSNSSIDGDQVQVHVPSSKNSNSSENKSKKGSSHGEHKSETKRASTTRGGSMGDLVMVNDEKGVFGLGDLMKAAAEVLGNGGLGSAYKAAMANGLSVVVKRMREMNKIGRDVFDAEMRQFGRIKHTNILTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTCHADLNWPTRLKIVKGIARGCGFLYNEFSNYELPHGNLKSSNIMLSDDYEPLLSEYAFYPLINPGAVQSMFAYKTTDYTEYQKVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGIDVVQWVFMAISERREEELIDPELKNSTSSLNNMLQLLQIGAACIESNPEQRITMKEAIRRIEEMQV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0185 627 Coils Coil 615 627 - -
Lan15g0185 627 MobiDBLite consensus disorder prediction 290 309 - -
Lan15g0185 627 Gene3D Phosphorylase Kinase; domain 1 359 429 - -
Lan15g0185 627 Pfam Protein kinase domain 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0185 627 SUPERFAMILY L domain-like 27 272 - -
Lan15g0185 627 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lan15g0185 627 PANTHER LRR RECEPTOR-LIKE KINASE 11 627 - -
Lan15g0185 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 627 - -
Lan15g0185 627 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0185 627 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Lan15g0185 627 MobiDBLite consensus disorder prediction 290 335 - -
Lan15g0185 627 SUPERFAMILY Protein kinase-like (PK-like) 357 622 IPR011009 -
Lan15g0185 627 Gene3D Transferase(Phosphotransferase) domain 1 430 627 - -
Lan15g0185 627 MobiDBLite consensus disorder prediction 310 325 - -
Lan15g0185 627 Gene3D Ribonuclease Inhibitor 137 333 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0185 Lan-Chr15 1991177 1994883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0185 1 627 Receptor kinase-like Gene Family AT3G42880 48.995 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan15g0185 Pkinase 2.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0185 - - gmx:100816925 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0960 12 16455235 16458285 Lan15g0185 15 1991177 1994883 PCT
Lan1g1314 1 22843434 22846297 Lan15g0185 15 1991177 1994883 PCT
Lan15g0185 15 1991177 1994883 Lan12g0960 12 16455235 16458285 PCT
Lan15g0185 15 1991177 1994883 Lan1g1314 1 22843434 22846297 PCT