Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0176 ATGCTTTCCTCAACTCAATTCAATTCAAACAAAACAAAAAACATGTCTCCTATGTCAACACTTGTTATTCACACACCTACTTTTCATACCTTATCCTTCAATTGCTCTCATAATTCTTACAAATTCCCAACAACATGTTCCACGTGGGCCATGGATTTCAGATTTTCACAAACAGTGAATAATAGCAATAGTAGTATGAAGAAGGAAGAGGAAGTTTCAGTGAAGCAATTTTCAAACCCATCGATTCCAAAGTTTGAAACTTTGAAGTCCAATAATCTCCAATTTGACCGTTTGCAACCATCGGATCAAGAATTGGGTCGAGGGAATAAGTTTGAGTTTGGGAATTTTGTTGCAAGAGAAGCTGTTCTTGATGAAGAATATTGGACAGCAGCATGGCTAAGGGCAGAAAGTCACTGGGAGAATCGAATGTATGAAAGATACGCCGATAACTTCAAAAGGAAATTTGCTGAGCAGGAATTCAATGCAGTAAAAAGGCGGTGCAAGTCACAGAGTGGGGAGACTTGTGCATGCATTATCACGGTCAAGAAAGAACAGAAGAATGTAAAGCGCTCAATATTAAAAAGTGTTGTAGGAACCCTCGATTTGAATATCCGATATTTACTTCAAGGGGAGACCTTTCCCGGGGAACGAGTGAAGGCCCCACACTTTTGCAGCATCAAGAGAACACCACCAAGCAGATATGGCTATATTTCAAACTTATGTGTTGCCAAATCTGCTCGTCGTCAGGGTATTGCAAGCAACACGTTGTATTTTGCTGTTCAAGCTGCAAAATCTAATGGTGTGACACAGTTATATGTGCATGTTGACAGGAATAACAATCCTGCACAGATATTGTATCAGAAGATGGGATTCGAGATGGTTGAAACAGCAAACTCCCGGTTCTTACTGGAGGAAACATACTTGTTACGATTGCAGATGTAA 942 0.4002 MLSSTQFNSNKTKNMSPMSTLVIHTPTFHTLSFNCSHNSYKFPTTCSTWAMDFRFSQTVNNSNSSMKKEEEVSVKQFSNPSIPKFETLKSNNLQFDRLQPSDQELGRGNKFEFGNFVAREAVLDEEYWTAAWLRAESHWENRMYERYADNFKRKFAEQEFNAVKRRCKSQSGETCACIITVKKEQKNVKRSILKSVVGTLDLNIRYLLQGETFPGERVKAPHFCSIKRTPPSRYGYISNLCVAKSARRQGIASNTLYFAVQAAKSNGVTQLYVHVDRNNNPAQILYQKMGFEMVETANSRFLLEETYLLRLQM* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0176 313 Pfam Acetyltransferase (GNAT) family 145 291 IPR000182 GO:0016407
Lan15g0176 313 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 231 298 IPR016181 -
Lan15g0176 313 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 18 313 - -
Lan15g0176 313 CDD NAT_SF 223 274 - -
Lan15g0176 313 Gene3D - 128 307 - -
Lan15g0176 313 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 223 313 IPR000182 GO:0016407
Lan15g0176 313 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 18 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0176 Lan-Chr15 1884765 1887640 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan15g0176 Acetyltransf_1 1.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0176 - - gmx:100795426 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1299 1 22700342 22702166 Lan15g0176 15 1884765 1887640 PCT
Lan15g0176 15 1884765 1887640 Lan1g1299 1 22700342 22702166 PCT