Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0173 ATGATGAATGGAAGCAACACTAGCAACATAAGGTATCCATTTACTCAATCACAGTGGCAAGAACTTGAGCATCAAGCTCTTATATATAAGTATATGGCTTCAGGTGTATCCATTCCACCTCATCTTATTTTCACTATCAAAAGGACCTTTTTGGATTCTCCTATCTCTTCAAGCCTTATGCATCCTCATCACTGGTGGAACTATCTGCAAATGGGTGTTGGAAGAAAAATAGACCCAGAACCAGGTAGATGCAGAAGAACAGATGGTAAGAAATGGAGGTGCTCAAAAGAAGCATATCCAGATTCTAAGTACTGTGAAAGACACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAACTTTTAAAAACACCAACAAATATTACATCAAACACTACAAATGATAATAACTCTGCATTAACCTCATCAACTACTCATTCTCTCTTGCATCAAACATCTTCTGTTTCCTCTAATACACACCATCATCCTTATTCTCTCTATAATCACCAACCATCAAGGTCTTCTAGTATTGGTTTCTCATTTGAAGATAATAGTTCAAATGCTCCAAGTTTTCTTGGCACTGGCTCTTGTTCTCAGACTAATACTGATAGCAGGACTAGATATGTTTATGGATTGAAAGAAGAGGTGGATGAGCATGCATTCTTTACAGAACAAACTGGTACAATGAGAAGCTTCTCTACTTCATCAATGGATGATTCTTGGCAACTAACACCATTGACAATGAGTTCTTCATCTTCTTCAAAACAGAGAAGCTGCAATGGTTTATCCAATGACTACCCTTACTTGCAACTTCAAAGCCTCAGTGATGATTCAAAACAGGTTGAAAATCAAGATCATGGTTGCTACAATATACGAGGTAGTAGTGCTAGTGATATCAAACATGAACCTCAGAAAACTGTTCATCGTTTCTTTGATGAATGGCCTCATAAAAGTAGTAGAGGATCATGGCTTGATTTGGATCATAAATCATCCACAACACAATTATCAATTTCAATTCCTACTTCTGCTCATGATTTCCCAAACTTCAGTTCCAGAACTCATCATGATGGTTGA 1077 0.3751 MMNGSNTSNIRYPFTQSQWQELEHQALIYKYMASGVSIPPHLIFTIKRTFLDSPISSSLMHPHHWWNYLQMGVGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELLKTPTNITSNTTNDNNSALTSSTTHSLLHQTSSVSSNTHHHPYSLYNHQPSRSSSIGFSFEDNSSNAPSFLGTGSCSQTNTDSRTRYVYGLKEEVDEHAFFTEQTGTMRSFSTSSMDDSWQLTPLTMSSSSSSKQRSCNGLSNDYPYLQLQSLSDDSKQVENQDHGCYNIRGSSASDIKHEPQKTVHRFFDEWPHKSSRGSWLDLDHKSSTTQLSISIPTSAHDFPNFSSRTHHDG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0173 358 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan15g0173 358 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Lan15g0173 358 PANTHER GROWTH-REGULATING FACTOR 6 9 345 - -
Lan15g0173 358 MobiDBLite consensus disorder prediction 109 170 - -
Lan15g0173 358 Pfam WRC 79 121 IPR014977 -
Lan15g0173 358 MobiDBLite consensus disorder prediction 121 170 - -
Lan15g0173 358 PANTHER - 9 345 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan15g0173 358 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan15g0173 358 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0173 Lan-Chr15 1852670 1855822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0173 2 121 GRF Transcription Factor Family AT3G13960 65.289 2.01e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan15g0173 WRC 7.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0173 - - gmx:100814271 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0977 12 16550559 16552902 Lan15g0173 15 1852670 1855822 PCT
Lan1g0427 1 3424527 3426958 Lan15g0173 15 1852670 1855822 PCT
Lan15g0173 15 1852670 1855822 Lan12g0977 12 16550559 16552902 PCT
Lan15g0173 15 1852670 1855822 Lan1g0427 1 3424527 3426958 PCT