Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0165 ATGAAGCCGTTTCTCTTGTTGAATCATCCTAATACTGTGTTTAGTTCTGGACAAGTTGATTCCGACCACTCAATGGATCATGCTCCTTATCCTTATGGCGATCCATTTTCGGGTGGTTCCTTAGTTGCTTATGAACCACAGGCTATTAATCAATCCCAAATGTTACCCCAGATGCTGGGATTAGCTTCCACCAGAGTTGCATTACCACTTGATCTTGCAGAAGACGGACCTATTTATGTCAATGCGAAACAATACCATGGTATATTGAGAAGGCGACAATCACGAGCAAAACTTGAGGCTCAAAACAAACTCATCAAAAGTCGCAAGCCGTATCTTCACGAGTCTCGGCACCGCCATGCTTTGAATAGGGTTAGGGGATCCGGGGGACGTTTTCTCAGTACCAAACAGCTTCAACAGTCTAATGCAGAACATGTCAATGGTGGACATTCTGGCTCAGACCCTGTCAACATATATCAAAAGAAAAATGCAACAGAAGGGCAAAGTCATCCCACAAGAACTGGAGAAAATGCATCATCCATCACTACCTATTCCGACCGGACATGCTTTTCAAATAACAGTGTCAGTTTTAGGCAGCCGGAGCGCATATTCCTAGGGAACTCTACAAACATAGGGGAGCATCACAGTAACATTGGACTCACCTTTGGCGGAACACAGCATCGTGCTTCAGTTGTCCGGTGA 699 0.4492 MKPFLLLNHPNTVFSSGQVDSDHSMDHAPYPYGDPFSGGSLVAYEPQAINQSQMLPQMLGLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRHALNRVRGSGGRFLSTKQLQQSNAEHVNGGHSGSDPVNIYQKKNATEGQSHPTRTGENASSITTYSDRTCFSNNSVSFRQPERIFLGNSTNIGEHHSNIGLTFGGTQHRASVVR* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0165 232 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 1 212 - -
Lan15g0165 232 MobiDBLite consensus disorder prediction 137 157 - -
Lan15g0165 232 PRINTS CCAAT-binding transcription factor subunit B signature 77 99 IPR001289 GO:0003700|GO:0006355
Lan15g0165 232 PRINTS CCAAT-binding transcription factor subunit B signature 108 131 IPR001289 GO:0003700|GO:0006355
Lan15g0165 232 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 77 131 IPR001289 GO:0003700|GO:0006355
Lan15g0165 232 SMART cbf3 73 134 IPR001289 GO:0003700|GO:0006355
Lan15g0165 232 Gene3D - 74 136 - -
Lan15g0165 232 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 212 IPR001289 GO:0003700|GO:0006355
Lan15g0165 232 ProSiteProfiles NF-YA/HAP2 family profile. 74 134 IPR001289 GO:0003700|GO:0006355
Lan15g0165 232 ProSitePatterns NF-YA/HAP2 subunit signature. 79 99 IPR018362 GO:0003677|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0165 Lan-Chr15 1818118 1819798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0165 30 185 CCAAT-HAP2 Transcription Factor Family AT1G17590 50.602 9.58e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lan15g0165 CBFB_NFYA 3.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0165 K08064 - gmx:100793856 328.561