Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0161 ATGAAGAAAAGATGCTTAGAACGCAGTCTGAAACTCACTCTTCCTGCATCTGATGAAGCTTCTTTTGCCAAGTTCATTGGAACATTTAAAGATGGGAACTTGCTTGTCAATAAAGATGGGGTTAGAGTTGTGTCTCAGAGTGAAGTAGAAGTTCCACCTCCAATCAGGGCACTGGATAACCAGTTAAGTTTGGCAGACATTGACACAATCAAAGTAATTGGAAAGGGAAATGGAGGAATAGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGGAAATCCAAGTGAATATTGAGGAACCGACATGCAGGCAAATAGGACAAGAACTAAAAATTAACAAATCAGCACAGTGTCCTTATGTTGTTGTCTGTTACCAGTCTTTCTATGTTAATGGTGTCATTTCAATCATCTTAGAGTACATGGATGGAGGATCCTTGGAAGATTTTCTTAACCAAGTTCATATAATTCCAGAGCCATATCTAGCTGCCATCTGTAAGCAGGTGGTGAAGGGTTTAATATATCTTCACCATGAAAAGCATATTATCCACAGGGACCTGAAACCTTCTAATTTACTTATAAATCATAGAGGAGAAGTAAAAATTACTGATTTTGGTGTGAGTGCAATCATGGACACTACATCTGGTCAAGCAAATACTTTCATTGGCACATATACCTATATGTCTCCAGAGAGAATCAATGGAAGCCAGCTTGGCTACAACTATAAAAGTGATATATGGAGTTTAGGACTGATATTGCTCAAATGCGCTACAGGGCGGTTTCCGTATTCACCACCAGATGAAAAGGAAGGATGGGATAACATTTTTCAGCTAATGGAAGCTATAGTTGAGAAACCTCCACCTAGTGCTCCATGTGATCAATTTTCTCCAGAATTTTGCTCATTTATCTCATCATGTTTACAGAAAAATCCAAGGGATAGACTATCAGCTCAGGACCTTGTGAGACATCCTTTTATCAACAAATATGAGGATTTGCATGTGGATCTTTCAGCTTACTTCTCCAATGCAGGGTCTCCACTAGCAACCATATTCTTGAATGTAGATCGCTAA 1080 0.387 MKKRCLERSLKLTLPASDEASFAKFIGTFKDGNLLVNKDGVRVVSQSEVEVPPPIRALDNQLSLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKEIQVNIEEPTCRQIGQELKINKSAQCPYVVVCYQSFYVNGVISIILEYMDGGSLEDFLNQVHIIPEPYLAAICKQVVKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMDTTSGQANTFIGTYTYMSPERINGSQLGYNYKSDIWSLGLILLKCATGRFPYSPPDEKEGWDNIFQLMEAIVEKPPPSAPCDQFSPEFCSFISSCLQKNPRDRLSAQDLVRHPFINKYEDLHVDLSAYFSNAGSPLATIFLNVDR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0161 359 ProSiteProfiles Protein kinase domain profile. 67 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0161 359 SUPERFAMILY Protein kinase-like (PK-like) 64 336 IPR011009 -
Lan15g0161 359 PANTHER MAP KINASE KINASE 1 353 - -
Lan15g0161 359 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Lan15g0161 359 Pfam Protein kinase domain 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0161 359 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 353 - -
Lan15g0161 359 CDD PKc_MAPKK_plant_like 65 333 - -
Lan15g0161 359 Gene3D Transferase(Phosphotransferase) domain 1 147 349 - -
Lan15g0161 359 Gene3D Phosphorylase Kinase; domain 1 45 146 - -
Lan15g0161 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Lan15g0161 359 SMART serkin_6 67 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0161 Lan-Chr15 1777987 1782405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0161 27 351 MAP Kinase Kinase Gene Family AT4G26070 67.073 1.62e-166 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lan15g0161 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0161 K20603 - gmx:100789734 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0993 12 16651401 16655873 Lan15g0161 15 1777987 1782405 PCT
Lan1g1282 1 22591721 22596533 Lan15g0161 15 1777987 1782405 PCT
Lan15g0161 15 1777987 1782405 Lan12g0993 12 16651401 16655873 PCT
Lan15g0161 15 1777987 1782405 Lan1g1282 1 22591721 22596533 PCT