Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0130 ATGAGTAACGGTTTCGCGAATGGTTCTTCACCTCGACGCCGGCGACCGGAAAATGATATTGAAGCTGGCCATGCGAGTAACCGCTCCGGTAAGTTTGATGACGCCGATTTGGATGATCCATTTGATATTACCAGAACTAAGAACGCTTCCGTTGAACGCCTCAGGCGTTGGAGACAAGCGGCTCTTGTGCTTAATGCTTCTCGTCGATTTCGTTACACTCTGGACTTGAAAAAAGAGGAGGAAAAGAAGCAAATATTGAGAAAGATAAGAGCACATGCACAAGCCATCAGGGCAGCATACCTGTTTAAAGCAGCAGCTGTACCTGTGGGGCAAGTGAATGAAACCATAAAACCTCCTTCGACCACCTCCACTGGGGAATTTCCAATTGGACAAGAGCAACTTGCGTCCATTTCAAGGGATCATGATACAACTGCTCTGCAACAATATGGAGGGGTTGCAGGGATATCAAATTTGTTGAAAACCGATTTAGAGAAGGGTGTTCTTGATGATGACACTGAATTACTGAAACGGAGGAACGCATTTGGTTCTAACAATTATCCCCGAAAGAAGGGAAGAAATTTTCTGATGTTTTTGTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATAGTAGCTGCTGCAGCTTCGTTGGCACTAGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATAGTTGTTACTGCTATAAGTGATTACAAGCAGTCACTTCAATTTCAAGACCTAAATGAAGAGAAGAGAAATATCCACCTGGAGGTTGTTAGAGGTGGTAGAAGGGTTGAGATCTCAATATATGATATTGTTGTTGGTGATGTTATACCACTTAATATTGGTAACCAGGTCCCTGCTGATGGAATCCTGATTATTGGTCACTCTCTTTCAATTGATGAATCAAGTATGACTGGTGAGAGCAAAATTGTTCATAAGGATTCTAAAGACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACCATGCTTGTAACTGGTGTTGGTATTAATACCGAATGGGGGCTTCTCATGGCTAGCATTTCAGAAGACACTGGTGAAGAAACACCTTTGCAGGTCCGCCTAAATGGTGTAGCCACCTTCATTGGTATAGTTGGACTTTCTGTTGCTGCTATTGTCCTGATTGTGCTACTGGCCAGATATTTCTCTGGGCATACTAAAAACCCAGATGGGAGTGTTCCATTTAAAGCAGGCAAGACTAAAGTTGGTGATGCTATTGATGGAGCAATTAAGATAGTAACTGTTGCGGTCACCATTGTAGTTGTTGCAGTTCCTGAAGGGCTTCCCTTAGCAGTGACCTTAACACTGGCCTACTCAATGAGAAAAATGATGGCCGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCCGCAACAACCATTTGCAGTGATAAGACTGGCACATTGACCATGAATCAGATGACAGTGGTTGAGGCTTATGCTGGTGGGAAGAAGATTGATCCTCCTCACAACAAGTCAGAGCTCTCTCCAATGCTTCACTCTTTGCTCATTGAAGGTGTTGCACAGAACACCAATGGCAGTGTTTATGTACCTGAGGGTGGTAATGATGTTGAGGTTTCTGGATCTCCGACAGAAAAGGCAATTTTACATTGGGCACTAAAGCTTGGGATGAATTTTGCGGCAGCCAGATCGGAATCATCTATTATTCATGTCTTTCCTTTCAATTCAGAGAAAAAACGAGGTGGAGTTGCAATACAGACGACTAACTCTGATGTCCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGCTGTACAGCGTATGTTGATGCAACTGAGCAGTTGGTGGAGCTGGATGAGGAGAAGATGACATTTTACAAAAAAGCTATTGAAGACATGGCTAGTGATAGTCTACGTTGTGTTGCCATTGCGTATAGACCATATGAAAAGGAGAGTGTTCCAACTAGTGAAGAACAACTTGCTCATTGGTCTTTACCAGAGGATAATCTTGTTTTACTTGCTATTGTTGGTATTAAGGATCCATGCCGACCTGGTGTCAAGGATGCAGTGCAGCTTTGCCAAAAAGCTGGTGTTAAGGTAAAAATGGTGACTGGTGACAATGTCAAAACTGCGAAAGCTATTGCTGTGGAATGTGGAATACTTGCTTCAATTGCTGATGCCACTGAGCCAAACATCATTGAAGGGAAAACATTTCGTGCATTGTCAGATGCTCAGAGAGAAGAAATTGCTGAACAGATATCGGTTATGGGACGATCATCTCCTAATGACAAGCTATTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCAGATATTGGTCTTGCAATGGGTATTCAAGGTACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTCGTCAGATGGGGGCGGTCGGTATATGCTAACATTCAGAAATTTATCCAGTTTCAGCTTACTGTCAATGTAGCAGCTCTTATTATAAATGTTGTTGCTGCTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGCTCCTTTGGGTCAACCTTATTATGGATACTTTGGGTGCACTAGCCTTGGCTACTGAACCACCAACTGATCACCTCATGGATCGTCCTCCAGTGGGTCGAAGAGAACCTCTCATAACAAATATCATGTGGAGAAATTTACTGATACAGGCTATGTACCAAGTGTCTGTATTGCTTGTTCTCAATTTCCGAGGTGTGAGCATTCTGGGATTGGGTCATGAGAAGCATGACCATGCGATCAAAGTAAAAAACACTTTGATCTTCAATGCATTTGTTTTCTCTCAAGTCTTTAATGAATTTAATGCACGGAAGCCAGATGAGTTCAACATATTCAAAGGAGTCACTAAAAACTTTCTCTTTATGGGAATAGTAGGATTAACTGTTGTGCTTCAGATTATCATCATTGAATTTCTTGGCAAGTTCACTACAACTGTCAGGCTTAATTGGCAGCAGTGGCTCATTTCTATCATCATTGGAGTGATCAGTTGGCCTCTTGCTGTGGTTGGAAAATTTATACCAGTTCCAGAAACTGCCATTAATAATGTTTTTTCGAGATTGCTTGGTCGAGGAAGAAGGAAGGATGAACCTACGGCTTCTTAA 3270 0.4272 MSNGFANGSSPRRRRPENDIEAGHASNRSGKFDDADLDDPFDITRTKNASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAAVPVGQVNETIKPPSTTSTGEFPIGQEQLASISRDHDTTALQQYGGVAGISNLLKTDLEKGVLDDDTELLKRRNAFGSNNYPRKKGRNFLMFLWDACKDLTLIILIVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFQDLNEEKRNIHLEVVRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILIIGHSLSIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAAIVLIVLLARYFSGHTKNPDGSVPFKAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPPHNKSELSPMLHSLLIEGVAQNTNGSVYVPEGGNDVEVSGSPTEKAILHWALKLGMNFAAARSESSIIHVFPFNSEKKRGGVAIQTTNSDVHIHWKGAAEIVLACCTAYVDATEQLVELDEEKMTFYKKAIEDMASDSLRCVAIAYRPYEKESVPTSEEQLAHWSLPEDNLVLLAIVGIKDPCRPGVKDAVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILASIADATEPNIIEGKTFRALSDAQREEIAEQISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGVSILGLGHEKHDHAIKVKNTLIFNAFVFSQVFNEFNARKPDEFNIFKGVTKNFLFMGIVGLTVVLQIIIIEFLGKFTTTVRLNWQQWLISIIIGVISWPLAVVGKFIPVPETAINNVFSRLLGRGRRKDEPTAS* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0130 1089 CDD P-type_ATPase_Ca_PMCA-like 174 933 - -
Lan15g0130 1089 Gene3D - 172 368 - -
Lan15g0130 1089 Pfam E1-E2 ATPase 270 470 - -
Lan15g0130 1089 SFLD p-type atpase 474 852 IPR044492 -
Lan15g0130 1089 PANTHER CALCIUM-TRANSPORTING ATPASE 27 1078 - -
Lan15g0130 1089 Pfam haloacid dehalogenase-like hydrolase 489 814 - -
Lan15g0130 1089 PRINTS Sodium/potassium-transporting ATPase signature 235 255 - -
Lan15g0130 1089 PRINTS Sodium/potassium-transporting ATPase signature 485 506 - -
Lan15g0130 1089 PRINTS Sodium/potassium-transporting ATPase signature 611 629 - -
Lan15g0130 1089 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 766 880 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan15g0130 1089 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 433 515 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan15g0130 1089 PANTHER CATION TRANSPORTING ATPASE 27 1078 - -
Lan15g0130 1089 Gene3D - 49 104 - -
Lan15g0130 1089 Pfam Ca2+-ATPase N terminal autoinhibitory domain 37 81 IPR024750 GO:0005516
Lan15g0130 1089 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 697 IPR023299 GO:0000166
Lan15g0130 1089 Pfam Cation transporter/ATPase, N-terminus 150 217 IPR004014 -
Lan15g0130 1089 Gene3D - 200 1058 - -
Lan15g0130 1089 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 141 1064 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lan15g0130 1089 SFLD Haloacid Dehalogenase 474 852 - -
Lan15g0130 1089 MobiDBLite consensus disorder prediction 12 39 - -
Lan15g0130 1089 ProSitePatterns E1-E2 ATPases phosphorylation site. 494 500 IPR018303 -
Lan15g0130 1089 PRINTS P-type cation-transporting ATPase superfamily signature 316 330 - -
Lan15g0130 1089 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Lan15g0130 1089 PRINTS P-type cation-transporting ATPase superfamily signature 693 704 - -
Lan15g0130 1089 PRINTS P-type cation-transporting ATPase superfamily signature 715 725 - -
Lan15g0130 1089 PRINTS P-type cation-transporting ATPase superfamily signature 800 819 - -
Lan15g0130 1089 PRINTS P-type cation-transporting ATPase superfamily signature 824 836 - -
Lan15g0130 1089 SUPERFAMILY HAD-like 490 905 IPR036412 -
Lan15g0130 1089 SMART Cation_ATPase_N_a_2 148 222 IPR004014 -
Lan15g0130 1089 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 1063 IPR023298 -
Lan15g0130 1089 SUPERFAMILY Calcium ATPase, transduction domain A 270 365 IPR008250 -
Lan15g0130 1089 Gene3D - 489 845 IPR023214 -
Lan15g0130 1089 Pfam Cation transporting ATPase, C-terminus 885 1061 IPR006068 -
Lan15g0130 1089 MobiDBLite consensus disorder prediction 1 39 - -
Lan15g0130 1089 Gene3D - 502 700 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0130 Lan-Chr15 984866 1000042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0130 9 1084 Primary Pumps ATPases AT5G57110 73.723 0.0 1605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0130 K01537 - gmx:100792945 1817.74