Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0129 ATGGGTGAAGAGGAAGTGAAAAGTAGTGTAGTTCCTGAATCTGTTTTGAAAAAGCAGAAAAGAAATGAAGAATTGGCATTAACTAAAACGCAGGAACTTGAAGCTGCGAAGAAAAAGAGGGTTCTTTCACGCAAATTGATTTTCAACAGAGCCAAACTCTACGCTAAAGAATATGAAAACCAGGATAAGGAACTGATTAGGTTGAAGCGTGAAGCCAAGCTTAGGGGTGGGTTTTATGTTGATCCTGAAGCTAAGCTCTTGTTCATTATCAGGATTCGTGGTATCAATGCTATGGACCCAAAGTCAAGGAAGATTTTGCAACTTCTGCGTTTGAGACGGATCTTCGGTGGTGTCTTTCTCAAAGTTAACAAAGCAACTGTGAACATGCTCCGCAGGGTTGAGCCATATGTTACCTATGGGTACCCAAATTTGAAGAGTGTCAGAGAATTGATCTACAAGAGGGGCTATGGAAAAGTTAACAAACAGAGAATCGCTTTGACCGACAACTCTGTTATCGAACAGACTTTGGGTAAGTATGGGATTGTTTGCATTGAAGATCTGATACATGAGATTTTGAGTGTTGGACCTCACTTCAAGGAGGTCAACAATTTTCTGTGGCCTTTCAAGCTGAAAGCTCCATTGGGTGGTTTGAAGAAGAAAAGGAATCATTATGTTGAAGGCGGCGACGCCGGCAACAGGGAAGTTTACATAAATGAGCTTATTAGAAGGATGAATTAG 738 0.4106 MGEEEVKSSVVPESVLKKQKRNEELALTKTQELEAAKKKRVLSRKLIFNRAKLYAKEYENQDKELIRLKREAKLRGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRRIFGGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVRELIYKRGYGKVNKQRIALTDNSVIEQTLGKYGIVCIEDLIHEILSVGPHFKEVNNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREVYINELIRRMN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0129 245 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 8 245 - -
Lan15g0129 245 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Lan15g0129 245 Gene3D - 86 191 IPR036919 -
Lan15g0129 245 Gene3D - 192 245 IPR036919 -
Lan15g0129 245 Coils Coil 51 75 - -
Lan15g0129 245 Pfam Ribosomal L30 N-terminal domain 11 82 IPR012988 -
Lan15g0129 245 PANTHER 60S RIBOSOMAL PROTEIN L7 8 245 IPR039699 -
Lan15g0129 245 TIGRFAM uL30_euk: 60S ribosomal protein uL30 12 245 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lan15g0129 245 CDD Ribosomal_L7_archeal_euk 86 245 IPR035808 -
Lan15g0129 245 SUPERFAMILY Ribosomal protein L30p/L7e 86 245 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0129 Lan-Chr15 971131 976204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0129 1 245 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 79.592 1.95e-146 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0129 K02937 - jre:109021767 402.905