Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0109 ATGGAAAACTACTATGATTCTGGCTTCCATATAGGGACTAACTTAGATGAATGCAGTGATCATTCTCCATTTTTAGTCCCTACACAAATACTACCTCATGTCTCTAACTATGAAGGTGCTGCAAAAAATAAAATTACAAGTGCATCAAAGAGCCATAGTCAAGCAGAAAAAAGGCGAAGAGACCGGATTAATACACAGCTTGCAAGTCTCAGAAAATTGATTCCTAAGTCTGATAAGATGGACAAAGCAGCTTTACTAGGAAGTGTTATAGACCATGTCAAAGATCTAAAGCGAAAAGCAAATGATATTGTAAGTAGTAGAGACTATATAGTTCCAACTGAATTTGATGAAATAACAATTGACTATGACCATGTTCAAGATGAAAAATCCACCACTAAAGTAAACAAATTCAAGGACAACTTCAACATAAAAGCTTCGGTTTGCTGCGATGATCGACCGGAACTGTTCGCCGAACTCATTCAAGTCCTCAAAGGCTGGAGACTCACAGCAGTTAAAGCTGATATAGTTAGTGTTGGTGGAAGAATTAAAAGCATACTAGTGCTTTGTTCTAAGGATAGTGAAGAGAGTGTTTGCATTAGTACTCTAAAACAGTCTCTTAAATCAGCACTCACCAAAATTGTATCAAACTTTTCCATGGCATCAAATTATAGCACTAGAAGTAAGAGGCAAAGGTCTTTCTTTCCTTCTCATTGCCTATAG 720 0.3694 MENYYDSGFHIGTNLDECSDHSPFLVPTQILPHVSNYEGAAKNKITSASKSHSQAEKRRRDRINTQLASLRKLIPKSDKMDKAALLGSVIDHVKDLKRKANDIVSSRDYIVPTEFDEITIDYDHVQDEKSTTKVNKFKDNFNIKASVCCDDRPELFAELIQVLKGWRLTAVKADIVSVGGRIKSILVLCSKDSEESVCISTLKQSLKSALTKIVSNFSMASNYSTRSKRQRSFFPSHCL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0109 239 CDD bHLH_AtAIG1_like 47 123 - -
Lan15g0109 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Lan15g0109 239 PANTHER TRANSCRIPTION FACTOR BHLH51 38 237 - -
Lan15g0109 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 108 IPR036638 GO:0046983
Lan15g0109 239 CDD ACT_UUR-ACR-like 146 181 - -
Lan15g0109 239 Gene3D - 41 104 IPR036638 GO:0046983
Lan15g0109 239 PANTHER TRANSCRIPTION FACTOR BHLH30 38 237 IPR045847 GO:0003700|GO:0006355
Lan15g0109 239 Pfam Helix-loop-helix DNA-binding domain 50 96 IPR011598 GO:0046983
Lan15g0109 239 MobiDBLite consensus disorder prediction 42 61 - -
Lan15g0109 239 SMART finulus 53 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0109 Lan-Chr15 750833 751963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0109 44 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 45.729 1.52e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan15g0109 HLH 4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0109 - - gmx:100799687 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0109 15 750833 751963 Lan2g1150 2 22762649 22764076 PCT
Lan2g1150 2 22762649 22764076 Lan15g0109 15 750833 751963 PCT