Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0100 ATGGGTGGACATTCCCCATGTGCTTCATGCAAACTACTAAGACGTAGATGCACCCAAGATTGCATCTTTGCTCCTTATTTTCCCTCTAATGACCCTCAAAAGTTTGCCATGGTTCACAAAGTGTTTGGTGCTAGCAACGTTAGCAAAATGTTACAGGAACTTCCTATTCAACAGAGAGCAGATGCAGTAAGCAGTTTAGTTTATGAAGCAAATGCAAGAGTGAGAGACCCAGTTTATGGTTGTGTTGGAGCCATATCTTACTTGCAAAACATGGTTTCTGAGCTTCAAATGCAACTTGCTGTGGCTCAAACTGAGATACTATGTGTCCAAATGCAACATGAACCAATGATGCCAAACACAGAAATTGAACCAATGATTCCACAGTACCTTAATAACTATGCTTCTTCTAGCAATGTAATTCATGATTCTTCTCTCAAGAGAGAGGATATTTGGACATGA 459 0.4009 MGGHSPCASCKLLRRRCTQDCIFAPYFPSNDPQKFAMVHKVFGASNVSKMLQELPIQQRADAVSSLVYEANARVRDPVYGCVGAISYLQNMVSELQMQLAVAQTEILCVQMQHEPMMPNTEIEPMIPQYLNNYASSSNVIHDSSLKREDIWT* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0100 152 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 127 - -
Lan15g0100 152 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 127 - -
Lan15g0100 152 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lan15g0100 152 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0100 Lan-Chr15 695708 696984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0100 3 117 AS2 family AT2G30130 84.348 4.49e-71 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan15g0100 LOB 3.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0100 - - pop:7462094 246.514