Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0088 ATGTCTCCGGCAACCGGATTCCACGTCCCACTCTTGCCGGATTCCAATCCCGGGAAGAAACAAGCGACTGTCTCCGGCGCTGTGTTCAACGTCGTAACTAGCATAGTCGGTGCCGGAATCATGTCAATTCCGGCGATCCTGAAGGTTCTAGGTGTGGTTCCGGCTTTCGCTATGATTCTAATCGTGGCGGTTCTGGCAGAAATATCGGTGGATTTTTTGATGAGGTTTACGAACTCTGTTGAAACGACGACGTATGCTGGCGTTATGAGAGAAGCGTTTGGACCTATAGGTGCATTATGTGTACAAATTTGTGTTATTATCACCAACACTGGTGGTTTAATTTTGTTTCTTATTATCATTGGGGATGTACTATCTGGAAAGCAAAATGGAGAGGAAGTGCACCTGGGCATTTTGCAGCAATGGTTTGGAATTCACTGGTGGAATTCCCGAGAATTCGCTCTGCTTGTCACCTTGGTCGTTGTCATGCTTCCATTGAACTTGTATCGACGTGTAGAATCCTTGAAGTACAGTTCTGCAGTATCAACCGCTCTTGCTGTGCTATTTGTTGGCGTATGTTCTGGGTTGGGAATTGTTGCTCTAGTGCAACGGAAAACACAAACTCCAAGATTATTTCCCAAGTTAGACTACCGAACTTCCTTCTTTGATCTGTTCACTGCAGTTCCAGTTGTAGTGACAGCCTTCACATTTCATTTTAACGTGCATCCTATTGGGTTTGAGCTTGCCAAGCAATCCGAAATGACGACAGCAGTTCAAATAGCATTAATGATCTGTGCTCTTCTCTACTTTACAATAGGTCTATTTGGGTACCTGTTGTTCGGGGATTCAACACAATCAGACATTCTCATAAATTTTGACCGGAATGCTGGTTCTGCACTTGGTTCCTTCTTCAATAGTTTAGTCCGGGTAAGCTATACACTCCACATCATGCTGGTGTTCCCTCTGGTGAACTTCTCTTTGAGAACAAACCTAGATGAACTAATGTTCCACCAGAAAACTCTGCTAGCAAAAGACAACAAAAGATTTCTGATCCTCACTTTGGTGCTGCTAGTCTTCTGTTACCTTGCTGCTATAGCAGTCCCAGATATTTGGTACTTCTTTCAGTTTATGGGATCAACATCTGCAGTGTGCCTTGCCTTCATTTTCCCTGGCATGATTGTTTTAAGGGATGTTCGTGGTATATCATCATCTAGGGACAAATTTATTGCACTGAGTATGATTATACTTGCTGTATTAACAAGTGTGATTGCCATTTCCACCAACATATACAATGTTTTTAGTAGCAAGTCATAA 1311 0.4302 MSPATGFHVPLLPDSNPGKKQATVSGAVFNVVTSIVGAGIMSIPAILKVLGVVPAFAMILIVAVLAEISVDFLMRFTNSVETTTYAGVMREAFGPIGALCVQICVIITNTGGLILFLIIIGDVLSGKQNGEEVHLGILQQWFGIHWWNSREFALLVTLVVVMLPLNLYRRVESLKYSSAVSTALAVLFVGVCSGLGIVALVQRKTQTPRLFPKLDYRTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKQSEMTTAVQIALMICALLYFTIGLFGYLLFGDSTQSDILINFDRNAGSALGSFFNSLVRVSYTLHIMLVFPLVNFSLRTNLDELMFHQKTLLAKDNKRFLILTLVLLVFCYLAAIAVPDIWYFFQFMGSTSAVCLAFIFPGMIVLRDVRGISSSRDKFIALSMIILAVLTSVIAISTNIYNVFSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0088 436 Pfam Transmembrane amino acid transporter protein 21 424 IPR013057 -
Lan15g0088 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
Lan15g0088 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0088 Lan-Chr15 603532 606230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0088 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.217 5.21e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0088 - - gmx:100815694 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1166 2 22860582 22863327 Lan15g0088 15 603532 606230 PCT
Lan9g1358 9 20686923 20690193 Lan15g0088 15 603532 606230 PCT