Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0086 ATGGATTGTTGTGTGTGCACAACTATGCCATTAATATTAAGGCCTCCAAGGAATACAATATGTGGGGCTTGTTATGAAGGAGCAAGGAACATGATCAATATGATGAACAATCTTCAAAGTGAAAAAGCAAAAGCAAAAGCAATCACTAATAATACAAATACTTCTCAACCTTCAAAGCCAAATACTAGTAAGACAATTGATGATTGTATAAGATGGTGTTCAGAGTTCATAGACATGTTTAATCAACAAAAAGAAGACTTGGCTTTTATGAGAGGCTTTGTTATTGCATTTAAAGAACAAATTCACACTGATATATTGGTCAATCCAGGCACAAATGGTCCACCCATACCTGCACATAAGTTCGTATTGGCGACAAGATCAGAAATGTTGAAGAACATGCTAGAATGTGATGACTGCAACTCTTCACCCAACAACACAATAACTATACCAGATTTGAACCATGAAGAACTAGAGTCTCTATTGGAATTTCTCTACAGTGGAACCTTAACAACAGAAACATTAGAGAAACATGTTTATACATTATCAAGAGCTGCTGATAAATACATAATCCCACATTTGTTGAAACATTGTGAAAGACACTTGTTGAGTTCACTAAACATCTCTAATGCTCTTGAAACACTTGATATTGCTGATTCATGTTCCAACCACAATTTGAAAGAGACAACCTTGAATTTCTTAGTTAAAAACTTTGAACATGTTGTCTCATCTACTAAATTTGAAGCATTTGTGCATAGGAATCCACATTTAACTGTGCAATTAGTTACAAGAGCATTTGCTAATAGTGCTAAATAA 813 0.3432 MDCCVCTTMPLILRPPRNTICGACYEGARNMINMMNNLQSEKAKAKAITNNTNTSQPSKPNTSKTIDDCIRWCSEFIDMFNQQKEDLAFMRGFVIAFKEQIHTDILVNPGTNGPPIPAHKFVLATRSEMLKNMLECDDCNSSPNNTITIPDLNHEELESLLEFLYSGTLTTETLEKHVYTLSRAADKYIIPHLLKHCERHLLSSLNISNALETLDIADSCSNHNLKETTLNFLVKNFEHVVSSTKFEAFVHRNPHLTVQLVTRAFANSAK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0086 270 Pfam BTB/POZ domain 100 204 IPR000210 GO:0005515
Lan15g0086 270 CDD BACK 206 246 - -
Lan15g0086 270 SUPERFAMILY POZ domain 90 203 IPR011333 -
Lan15g0086 270 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 269 IPR044784 -
Lan15g0086 270 ProSiteProfiles BTB domain profile. 103 173 IPR000210 GO:0005515
Lan15g0086 270 Gene3D - 204 270 - -
Lan15g0086 270 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 269 - -
Lan15g0086 270 Coils Coil 28 48 - -
Lan15g0086 270 SMART BTB_4 103 205 IPR000210 GO:0005515
Lan15g0086 270 MobiDBLite consensus disorder prediction 44 64 - -
Lan15g0086 270 Gene3D Potassium Channel Kv1.1; Chain A 74 202 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan15g0086 BTB 5.8e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0086 K10523 - gmx:100814664 439.113