Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0078 ATGAATCATTCTTGTATGAACTTCAATAGAAAAGCCTTCCAAATCCTTACCACCTTTCTTCTTTTATGCCCGAACTTATGCTCGAATTCGGCAACAGCAGCTATACCAGCAGCAGGAAATGTAACTGATTTTCATGCCTTACTTGACTTCAAGAATCACATAGTTGGAGATCCATTACAAATTATGAGTTTGTGGAATGATTCCACCAATCACTGCAACTGGACCGGGATAACCTGCAACATATCGAATGGAAGGGTGATCTACCTGAACCTTTCATCACAAGGATTGGCAGGCACTGTTACACCATCTATCGGAAACCTCACATTCCTCACAAGACTCAACCTGCTAAGCAATAGCTTCTATGGTGAATTGCCGCAAGAGGTGGGGCGTCTGCTGTATTTGCAACGGCTAAACATCGATTACAACAACTTCGCTGGGCGCATTCCAAGTAATCTAAGTCGCTGTACAGAACTAACCGGACTGTCCGCAGGCGCAAACAACCTCACCGGAACAATACCAACATGGATAGGAAATTTATCTTCTTTAGTTGGTATTTCCTTTTCGATGAACAATTTGCATGGAAGTATACCACATGAAGTAGGTAGTTTATCAAGCTTGACATTTCTTGGGGTATATGGGAATTACTTGTCTGGCACGATTCCTTCTTCAATTTATAATATTTCTTCCATATTCTATTTCACTGTGGCTCAGAATAATCTCCATGGAAACATACCGGCTAACATCGGCTTTACTCTTCCAAACCTTCAAGTATTTGCTGGTGGTGTCAACAGTTTCACAGGGACTATTCCTGCATCATTGTTGAATGCATCAAAACTAGAAGTTCTAGACTTTGCTTCAAATGGTCTCACTGGCACACTACCTAAGAATATAGGGATCTTGAATCGGTTAACTAGACTTAATTTCGATGACAATAGACTTGGAACTGGGAGAGCTGATGGCCTTAGCTTTCTTGATTCTTTGGTCAACTGCACGGTTTTAGAAACTTTAGGTCTAGCTATGAATACTTTTGGCGGCGAGTTGCCCAGATCAATTGCTAATTTCTCGAAGCAATTGCGCACATTTACTATAGGTTCCAACGGAATACAGGGAAACATACCTGTTGGAATTAGCAATCTTGACAACATGGCTAAACTAGGATTAGAAGGAAATCGCCTAACGGGTAGTGTTCCGGATGAATTAGGTATGCTGCAAAATCTGAAAGAGTTATATCTGAATGGCAACAAGTTTTCAGGAAGAATTCCATCCTCCATAGGAAATTTATCTTCATTAACGAAACTCTTTCTCGAGGAGAACAACTTCGAGGGAACTATACCTGCTAGTCTTGCAAAATGCCGAAAGTTATTGACACTTAGCCTTTATAGAAACAAGCTTAGTGGCACCATACCAGAAGAAGTTATCAGTCTTTCTTCACTAGCTATATACTTGGATGTGTCTCATAATGCTTTGTCAGGAACATTGCCATATGAAGTCGGTAAGTTAGTTAATCTCGGAAAGTTGGTGTTGTCAGAGAACAATTTCTCTGGAGTCATTCCATCTTCTCTTGGAAGCTGCACTAGTTTGGAACAATTGCATTTGCAGGGTAACCATTTTGAGGGAAACATTCCTCAAACTTTAACAAATCTGAAAGGCTTAGAGGATATTGATCTTTCACGCAATAACTTGTCCGGTAAGATTCCTGAATTTCTTGGTGATTTCAAGGTGCTCCAGCATCTCAATCTATCTTACAACGATTTCGAGGGAGAAATACCGAAGAATGGGATCTTCAAGAATGCATCATCTATATCAATATATGGAAATAAAAAACTTTGTGGCGGTGTCCCAGAATTAAAATTACCTGCATGCACCATAAAGAAAGCCTCTTTGCAAAGAAAACTTCTTGCCACCAAGGTTGCTATCCCTGTAGCTAGTGCACTTCTTATATTTTTACTCTTCCTATCATGCTTTATTATAATCTCTACCATGATAAAAAGATCGAGAAAAGGAAGTTCCATGTCGACTACTACAAACAATTCGGAATTAGAAATTTCATACTCAGAAATTGCGAAGTGCACCGGTGGATTCTCCCAGGATAACCTGATTGGCTCAGGAAGTTTTGGTTCTGTTTACAAAGGAACCCTTTCAAGTGATGGATCAATTGTGGCGGTTAAAGTACTAAATCTTCGACAAAGAGGAGCCTCTAGGAGCTTCATCGACGAATGTCAAGTTCTAAGAAGTATAAGGCATCGCAATCTTCTCAAGATCATCACTGCCATCTCAAGTGTTGATCGTCAAGGTAATGAGTTCAAAGCGTTGGTCTTCGAGTTCATGTCAAATGGAAGTCTAGAAGATTGGTTGCATCCTACAAATACTCTGCAATATCAGACCAAGACATTGACATTTATCCAAAGACTGAACATAGCAATTGATGTTGCTTGTGCACTCGAATATCTCCACCACTCGTGCGAAACATCGATCGTTCATTGTGATATAAAGCCGAGCAATGTACTCCTCGACAACGATTTGGTAGCCCATGTTGGTGACTTTGGATTAGCTACATTTCTATATGAAGAATCAAGCAACTTTTCCAGACAATCACATAGTTCAGCTAATCTAAAGGGTTCTATTGGATACATCCCTCCAGAGTATGGCATGGGTGGCAAGCCTTCTATACTAGGAGATATATACAGTTATGGGATACTACTATTGGAGATTTTCACAGGAAAAAGACCAACAAATGATGCATTTGAAGGTGGCATTGGAATTCAGGAGTTTATAGCAATGGCTTTACCTAACAATGTAATGGATATAATAGATCCTTCATTGTTTAAACAAGAATTTGGTGAAGAAAATCATGAACTTGAAGTAGAAGAAAATGCTATAATGAGGGAATTTGACATTGAAAACCAAGCTAAAAGTTTCATGGAGGATTTCATTGTTTCACTAATGCAAATTGGAGTGTCTTGCTCTTCAACTTTACCAAGTGAAAGGATGCATATTACTAGTGTGGTTAATAAACTACAAGCTATCAAGAACTCTTTCATGAAGATAAAGCAAAATGCTATATGA 3066 0.393 MNHSCMNFNRKAFQILTTFLLLCPNLCSNSATAAIPAAGNVTDFHALLDFKNHIVGDPLQIMSLWNDSTNHCNWTGITCNISNGRVIYLNLSSQGLAGTVTPSIGNLTFLTRLNLLSNSFYGELPQEVGRLLYLQRLNIDYNNFAGRIPSNLSRCTELTGLSAGANNLTGTIPTWIGNLSSLVGISFSMNNLHGSIPHEVGSLSSLTFLGVYGNYLSGTIPSSIYNISSIFYFTVAQNNLHGNIPANIGFTLPNLQVFAGGVNSFTGTIPASLLNASKLEVLDFASNGLTGTLPKNIGILNRLTRLNFDDNRLGTGRADGLSFLDSLVNCTVLETLGLAMNTFGGELPRSIANFSKQLRTFTIGSNGIQGNIPVGISNLDNMAKLGLEGNRLTGSVPDELGMLQNLKELYLNGNKFSGRIPSSIGNLSSLTKLFLEENNFEGTIPASLAKCRKLLTLSLYRNKLSGTIPEEVISLSSLAIYLDVSHNALSGTLPYEVGKLVNLGKLVLSENNFSGVIPSSLGSCTSLEQLHLQGNHFEGNIPQTLTNLKGLEDIDLSRNNLSGKIPEFLGDFKVLQHLNLSYNDFEGEIPKNGIFKNASSISIYGNKKLCGGVPELKLPACTIKKASLQRKLLATKVAIPVASALLIFLLFLSCFIIISTMIKRSRKGSSMSTTTNNSELEISYSEIAKCTGGFSQDNLIGSGSFGSVYKGTLSSDGSIVAVKVLNLRQRGASRSFIDECQVLRSIRHRNLLKIITAISSVDRQGNEFKALVFEFMSNGSLEDWLHPTNTLQYQTKTLTFIQRLNIAIDVACALEYLHHSCETSIVHCDIKPSNVLLDNDLVAHVGDFGLATFLYEESSNFSRQSHSSANLKGSIGYIPPEYGMGGKPSILGDIYSYGILLLEIFTGKRPTNDAFEGGIGIQEFIAMALPNNVMDIIDPSLFKQEFGEENHELEVEENAIMREFDIENQAKSFMEDFIVSLMQIGVSCSSTLPSERMHITSVVNKLQAIKNSFMKIKQNAI* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0078 1021 SUPERFAMILY Protein kinase-like (PK-like) 667 1006 IPR011009 -
Lan15g0078 1021 ProSiteProfiles Protein kinase domain profile. 694 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0078 1021 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 38 1010 - -
Lan15g0078 1021 Pfam Leucine rich repeat N-terminal domain 43 80 IPR013210 -
Lan15g0078 1021 SMART serkin_6 694 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0078 1021 Pfam Protein kinase domain 695 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0078 1021 SUPERFAMILY L domain-like 40 313 - -
Lan15g0078 1021 Pfam Leucine Rich Repeat 405 427 IPR001611 GO:0005515
Lan15g0078 1021 Gene3D Transferase(Phosphotransferase) domain 1 776 1020 - -
Lan15g0078 1021 SUPERFAMILY RNI-like 236 592 - -
Lan15g0078 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Lan15g0078 1021 Gene3D Phosphorylase Kinase; domain 1 656 775 - -
Lan15g0078 1021 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Lan15g0078 1021 Gene3D Ribonuclease Inhibitor 100 318 IPR032675 -
Lan15g0078 1021 Gene3D Ribonuclease Inhibitor 37 99 IPR032675 -
Lan15g0078 1021 Gene3D Ribonuclease Inhibitor 319 628 IPR032675 -
Lan15g0078 1021 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 38 1010 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0078 Lan-Chr15 530799 535480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0078 29 374 Receptor kinase-like Gene Family AT3G47570 28.818 2.72e-26 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan15g0078 Pkinase 7.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0078 - - gmx:106794146 1433.7