Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0075 ATGTTTGCTCCTAATGATATGGAAAGAAATGGTGATGGGAAGACTCATGATTCAGACTCTTCAGTTCCCCATTCGGCTCTGAAGATGGGATTGAGAGAACGCACCAGCAGCAACATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATTGAGCAGTTGCGTCAGAGCTCATCGTCTGTGCAAGAGAAGGAGCGTTCCTTGAAGCAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCCGTTGGATCACACTCTCAGGCAGTTCCAGTACTTGTGTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAAGCAGCAACTGTATTGGGATCCCTTTGTAAAGAAAATGAGCTAAGGGTGAAAGTATTACTTGGAGGATGCATTCCTCCATTGCTCGGTCTACTCAAGTCAAGTTCAGCTGAAGGGCAAGTTGCTGCTGCAAAGACTATTTTTGCTGTGACTCAAGGTGGTGCCAAAGATCATGTTGGATCAAAAATCTTTTCAACTGAAGGAGTTGTGCCGGTGCTCTGGCAGCAGCTGCAAAAGGGCCTCAAGAGTGGAAATGTAGTTGATAGTTTATTGACTGGAGCATTGAAGAATCTCTCCAGCAGTACTGAAGGGTTCTGGAATGCCACAGTACAAGCTGGAGGAGTGGACATACTAGTGAAGTTACTGACAACGGGACAGTCTAGTACTTTAGCTAACGTGTGCTTTTTACTTGCCTGTATGATGATGGAGGATGCATCTGTATGTTCAAAGGTGTTGACAGCAGAGGCAACAAAGCAACTCCTCAAACTTTTAGGCCAAGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCGCTCTCGGCCCAGAGCAAAGATGCAAGGCGGGAGATATCAAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCCAAGGAGTTCATGCAAGGTGAATATGCCCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTGTCTTCTGTCATCTCCAGCCTTGGTCAAAGCCTGGAATCGTGCACCTCACCTACCCAAAGTGCTGACACCTTAGGGGCTTTAGCTTCCGCTCTTATGATATATGATGACAAGGCGGAATCTACTAAAGCATCAGATCCGTTGGTAGTTGAGCAGACTTTACTCAAGCAATTTAAACCTCATGTACCCTTCCTTGTGCAGGAACGGACCATTGAAGCCCTAGCTAGTTTGTACAGCAACCCCATGCTCTCTATTAAGCTTGAAAGTTCTGATGCAAAGCGTTTGCTTGTTGGTCTAATAACAATGGCTGCCAGTGAAGTGCAAGAGGAGCTTCTAAAAGCTCTCTTGACACTGTGCAATGGTGAAGGCAGTCTATGGCGCACACTTCAAGGCCGTGAAGGAGTTCAGCTGCTGATATCTCTTCTGGGGCTTTCATCAGAGCACCAGCAAGAATGTGCTGTTTCACTCCTTTGCCTTCTATCTAATGAAAATGACGAAAGCAAATGGGCCATTACAGCTGCTGGTGGTATACCTCCACTTGTTCAAATCTTGGAGTCAGGATCAGTTAAAGCAAAGGAAGATTCCGCAACAATCCTTAGGAACCTATGCAATCACAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGTTATTGAAGAATGGAAGCCCAAACGGGAAGGAGATTGCAGCGAAGACCTTGAATCACTTGATTCATAAATCTGATACCGCAACTATCAGTCAGCTTACAGCATTATTGACTAGTGATCTTCCTGAATCTAAGGTTTATGTTTTAGATGCTTTGAGAAGTATGCTTTCTGTTGTTCCTCTTGGTGATATTCTACGTGAAGGTAGTGCTGCAAGTGATGCAATTGATACAATGATAAAAATATTGAGGTCGACCAAGGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGCGAAAGCAGCATTGCTGTTAAAACGCTTTGGTCAGTCATGAAGTTGCTTAGTGTTGAATCTGAAAGTATCTTAATAGAGTCGTCACGCTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTATTGCTAGAGATGCATTATCACCTCTAGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTGGCAGAGTTGGCAACATGTGCTTTGGCAAATCTTATTTTAGATAGTGAAACTGCAGAGAAAGCTGTTGCCAAAGACGTTATCTTGCCTGCTACCAAAGTATTACGCGAAGGCACAATTTCTGGTAAAACACATGCTGCAGCAGCAATTGCTCGCCTCTTACATTCTAGAAAAGTTGATTTTTCTGTAATTGACTGTGTCAATCGTGCTGGCACTGTTCTGGCACTAGTTTCTTTCTTAGACTCTGCTATTAATGAATCTGTTGCCACGTCCGAGGCTCTAGAAGCACTTGCCATTTTGTCCAGGTCGGAAGTGACCAATGCACATAGTAAACCTGCATGGGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCCTGTCTATTGCTGATTCAACACCGATGTTGCAGGATAAAGCTATTGAGATATTATCTCGATTATGCAAGGATCAGCCTGTTGTCTTAGGAGACACTGTTGTTACTGCCACTGGATGTATATCTTCAATAGCTAAGAGGATAGTCAGTTCCACTTCTACAAATGCAAAGGTCAAAACCGGGGGCGCTGCAGTTCTTATTTGTGCTGCAAAAGTAAATCACCAGAGACTGGTGGAAGATCTCAATTTATCAAACTTGTCTGCAGATCTTGTTCAGTCTCTTGTTGATATGCTTATTTCTGAACAGCGTTGTTTGGGTAATCAAGATGATGACAACAAGGAAGTCATCAGCATTTACAGGCTTACAAAAGAAGAAGCCAATGGTGGTGAATCCAACACTGGCACTGCCACTATATCTGGTGCCCACTTAGCTACGTGGTTACTGTCTATTCTTGCTTGTCATGATCAAAGAAGTAGAATTGCAATAATGGAGGCTGGTGCAATTGAGGTTCTCACCGATATGATTTCAAATTGTTACTCACAATATAGTCAGATTGAGTATAAAGAAGATAGCAGCATGTGGATTTCTGCTTTACTGTTGGCAATATTATTTCAAGACAGAGATATCATACGAGAAAATGCAACCATGAAATCTATACCAGCCCTCGCCAATTTATTAAAGTCAGAGGAATCAGCCAACAGATATTTTGCTGCACAAGCAATTGCTAGCCTAGTCTGTAATGGTAGTAGGGGAACTCTTCTGTCTGTGGCAAATTCCGGGGCAGCAGGTGGACTTATCACCTTGCTTGGCTGTGCAGATTCTGATATACAGGATCTTCTACAACTGTCAGAGGAATTTTCATTGGTGCGCTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGAGTTGGTGCCGCATCTCGGAAGGCAATACCTGCCCTAGTTGATTTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAACAATTGGGCTTTTGACTCAGCTTGCTGGAGATTGTCCACCAAATACGATTCTAATGGTAGAGTCTGGAGCTTTAGAGGCACTTACTAAGTATCTTTCACTGGGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGCAGCGCTGAGATACGAAGACATGAGTCAGCTTTTGGTGCTGTTCCTCAACTTGTGGCTGTACTACGGTTAGGAGGAAGAGCTTCAAGGTATAGTGCTGCAAAAGCCTTGGAAACTTTATTCTCTGCTGATCATATTAGAAATGCAGAGAGTGCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAACACTGGTTTAGAGAGGGAGCAGCATGCTGCAATTGCTGCGTTGGTTAGGCTACTGAGTGAAAACCCTTCAAGGGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTCCTTTGCAGGATCCTTTCATCAGACTGCTCATTGGACCTCAAAGGGGATGCTGCTGAATTATGCTGTGTTCTTTTCGGAAATACCAGGATTCGGTCCACGATGGCTGCTGCCCGCTGTGTTGAACCTCTGGTCTCTCTCCTTGTTTCTGAGTATAGTCCTGCTCAACATTCAGTTGTCCGGGCTTTGGACAAGCTTGTAGATGATGAGCAACTGGCTGAATTAGTTGCTGCTCATGGTGCAGTTATTCCTCTAGTTGGCCTACTGTACGGTAGGAACTATGTGCTTCACGAGGCCATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGATAGACCTGCTTGTAAAATGGAAATGGTGAGAGCTGGAGTTATTGAATGCATACTTGACATCCTACATGAAGCACCTGATTATCTATGTGCAGCTTTTTCAGAATTGTTGCGTATATTGACCAATAACGCTAACATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCCCTGCTTTTGTTGCTGACTAGACATGAATTTGGGCCTGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAGCATCCACAGTGTCGTGCTGATTATTCATTGACTTCTCACCAAGCTATCGAGCCACTTATTCCCTTGCTTGATTCTCCAATATCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCACATCTTCTTTTAGAAGAACACCTTCAGAGAGATTCTGTGGCACAGCAAGTAATTGGCCCTCTTATACGAGCTCTTGGTTCTGGTATACATATATTGCAGCAGAGAGCTGTCAAGGCTCTGGTTGGTATTGCACTGATATGGCCAAATGAAATTGCGAAAGAGGGTGGTGTTTTTGAAATTTCCAAAGTGATATTGCAAGAAGATCCTTCCCTTCCTCATGCTGTATGGGAGTCTGCTGCCTCTATTTTGGCAAGTATTCTTCAATATAGTTCTGAATTCTACTTGGAGGTGCCTGTTGCTGTTTTGGTAAGGCTGCTTCGGTCTGGCTTAGAGGGCACAGTTGTCGGTGCGTTGAATGCTCTTCTTGTATTGGAAAGTGATGATGGAACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTCTTGGAACTCCTAAGATCCCATCAGTGTGAGGAAACTGCTGCAAGACTCTTAGAGGTATTGCTGAACAATGTAAAGATCAGAGAAACAAAAGTTACTAAATCAGCTATCTTACCATTATCCCAGTACCTCTTGGATCCACAAACCCAAGCACAGCAGGCAAGGTTGTTGGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGACTTGCTCGAACACCTGATGCGGTTTCAGCTTGTCGTGCTTTAGTAAATGTGCTTGAAGACCAACCAACCGAAGAAATGAAAGTCGTAGCCATATGTGCTTTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGAGCTGTTGCAGAGGCCGGTGGTGTTCAGGTCATATTGGATCTGATAGGTTCAAGTCATCCTGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTCTTTTCAAATCACACTATTCAAGAGTATGCCTCTAGTGAAACTGTCAGGACGATAACTGCTGCTATTGAAAAAGATTTATGGGCTACTGGAACTGTGAACGATGAGTATTTGAAAGCTTTAAATTCTCTATTTAGCAACTTCCCACGACTGAGAGCAACCGAACCAGCAACTCTTAGCATTCCACATCTCGTTACATCCTTGAAGACAGGTTCAGAGGCTTCTCAGGAAGCTGCATTGGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCAGAAGTTTCAAGAGCCCAGTCCATAGCAGCTGCAGATGCTATCCCTTTGCTGCAGTACTTAATCCAGTCCGGACCGCCTCGGTTTCAGGAGAAGGCAGAATTCTTATTGCAGTGTTTGCCGGGAACGTTGGTGGTGATCATAAAGCGCGGTAATAATATGAAGCAGTCTGTTGGTAATCCAAGTGTTTATTGTAAACTTACACTTGGCAACACCCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCAGATTGGGATGAGAGCTTTTCATGGTCCTTCGAGAGTCCTCCAAAAGGCCAAAAACTTCATATTTCTTGCAAAAATAAGAGCAAAATGGGAAAGAGTTCATTTGGAAAAGTTACAATCCAGATTGATAGGGTGGTAATGTTGGGAGCAGTATCTGGAGAATATACACTGTTACCAGAAAGCAAAAGTGGGCCATCAAGGAATTTAGAAATAGAATTTCAGTGGTCTAATAAATAA 6420 0.4383 MFAPNDMERNGDGKTHDSDSSVPHSALKMGLRERTSSNMEDPDGTLASVAQCIEQLRQSSSSVQEKERSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIFAVTQGGAKDHVGSKIFSTEGVVPVLWQQLQKGLKSGNVVDSLLTGALKNLSSSTEGFWNATVQAGGVDILVKLLTTGQSSTLANVCFLLACMMMEDASVCSKVLTAEATKQLLKLLGQGNDAPVRAEAAGALKSLSAQSKDARREISNSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSSVISSLGQSLESCTSPTQSADTLGALASALMIYDDKAESTKASDPLVVEQTLLKQFKPHVPFLVQERTIEALASLYSNPMLSIKLESSDAKRLLVGLITMAASEVQEELLKALLTLCNGEGSLWRTLQGREGVQLLISLLGLSSEHQQECAVSLLCLLSNENDESKWAITAAGGIPPLVQILESGSVKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVPLGDILREGSAASDAIDTMIKILRSTKEETQAKSASALAGIFETRKDVRESSIAVKTLWSVMKLLSVESESILIESSRCLAAIFLSIKENRDVAAIARDALSPLVALANSSVLEVAELATCALANLILDSETAEKAVAKDVILPATKVLREGTISGKTHAAAAIARLLHSRKVDFSVIDCVNRAGTVLALVSFLDSAINESVATSEALEALAILSRSEVTNAHSKPAWAVLAEFPKSISPIVLSIADSTPMLQDKAIEILSRLCKDQPVVLGDTVVTATGCISSIAKRIVSSTSTNAKVKTGGAAVLICAAKVNHQRLVEDLNLSNLSADLVQSLVDMLISEQRCLGNQDDDNKEVISIYRLTKEEANGGESNTGTATISGAHLATWLLSILACHDQRSRIAIMEAGAIEVLTDMISNCYSQYSQIEYKEDSSMWISALLLAILFQDRDIIRENATMKSIPALANLLKSEESANRYFAAQAIASLVCNGSRGTLLSVANSGAAGGLITLLGCADSDIQDLLQLSEEFSLVRYPDQVALERLFRVDDIRVGAASRKAIPALVDLLKPIPDRPGAPFLTIGLLTQLAGDCPPNTILMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVPQLVAVLRLGGRASRYSAAKALETLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSDCSLDLKGDAAELCCVLFGNTRIRSTMAAARCVEPLVSLLVSEYSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEAISRALVKLGKDRPACKMEMVRAGVIECILDILHEAPDYLCAAFSELLRILTNNANIAKGPSAAKVVEPLLLLLTRHEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPISAVQQLAAELLSHLLLEEHLQRDSVAQQVIGPLIRALGSGIHILQQRAVKALVGIALIWPNEIAKEGGVFEISKVILQEDPSLPHAVWESAASILASILQYSSEFYLEVPVAVLVRLLRSGLEGTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTPDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSHPETSVQAAMFIKLLFSNHTIQEYASSETVRTITAAIEKDLWATGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEASQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTKVVSTGPNPDWDESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGEYTLLPESKSGPSRNLEIEFQWSNK* 2140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0075 2139 Pfam Armadillo/beta-catenin-like repeat 90 120 IPR000225 GO:0005515
Lan15g0075 2139 Pfam Armadillo/beta-catenin-like repeat 511 550 IPR000225 GO:0005515
Lan15g0075 2139 Gene3D - 631 803 IPR011989 -
Lan15g0075 2139 Gene3D - 805 1167 IPR011989 -
Lan15g0075 2139 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 265 309 IPR000225 GO:0005515
Lan15g0075 2139 Pfam C2 domain 2018 2114 IPR000008 -
Lan15g0075 2139 SUPERFAMILY ARM repeat 1395 1646 IPR016024 -
Lan15g0075 2139 CDD C2 2020 2110 - -
Lan15g0075 2139 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 9 2139 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lan15g0075 2139 Gene3D - 391 630 IPR011989 -
Lan15g0075 2139 Gene3D - 1354 1632 IPR011989 -
Lan15g0075 2139 SUPERFAMILY ARM repeat 49 757 IPR016024 -
Lan15g0075 2139 Gene3D C2 domain 2018 2139 IPR035892 -
Lan15g0075 2139 SUPERFAMILY ARM repeat 1568 2016 IPR016024 -
Lan15g0075 2139 SMART arm_5 1172 1215 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1427 1467 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 297 346 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 553 593 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 719 757 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1718 1757 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1386 1426 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1845 1885 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 122 162 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 803 845 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1217 1258 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 511 551 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 80 121 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1299 1340 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1469 1508 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 1554 1595 IPR000225 GO:0005515
Lan15g0075 2139 SMART arm_5 254 295 IPR000225 GO:0005515
Lan15g0075 2139 Gene3D - 36 390 IPR011989 -
Lan15g0075 2139 Gene3D - 1640 2017 IPR011989 -
Lan15g0075 2139 Coils Coil 283 303 - -
Lan15g0075 2139 SUPERFAMILY ARM repeat 566 1280 IPR016024 -
Lan15g0075 2139 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2017 2136 IPR035892 -
Lan15g0075 2139 ProSiteProfiles C2 domain profile. 1999 2116 IPR000008 -
Lan15g0075 2139 Coils Coil 63 83 - -
Lan15g0075 2139 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 9 2139 - -
Lan15g0075 2139 SMART C2_3c 2019 2115 IPR000008 -
Lan15g0075 2139 Gene3D - 1168 1353 IPR011989 -
Lan15g0075 2139 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 522 564 IPR000225 GO:0005515
Lan15g0075 2139 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0075 Lan-Chr15 502352 515284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0075 474 606 U-box Gene Family AT2G23140 40.741 5.05e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0075 - - gmx:100816765 3667.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1832 1 33300769 33312111 Lan15g0075 15 502352 515284 PCT
Lan1g1604 1 27391248 27401707 Lan15g0075 15 502352 515284 PCT