Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0070 ATGGCTTACAATAATAATAGCAACATGACCCAAGATTTCTTAGAGCCATGTAGTGAAGAGTTAATGAAAACACTTGAAACTTATGTGAAAAGTGAATCATATTCATATAACTCTTCCTTCTCTATTTCAAATTCTACCCCAAACCCTTCATCACATTTTTCCAATTTATATCCAAACACAAGTTCCATCAAGCTAAATCAACTCACACCATCACAACTTCTTCAAATTCAATCTCAAATCCATATTCAACAACAACAAAATCAACAACATAGGCTAATGCAATTGCAACATACAAATCAACATTCCGTAAGTTTTCTTAGCCCAAAAAATGTTCCTATGAAGCACATAGGTACTCCTAATGCAAAACCAACAAAGCTATATCGTGGAGTGAGACAAAGACATTGGGGAAAATGGGTAGCTGAAATAAGACTTCCAAAAAATAGAACTCGTCTTTGGCTTGGAACATTTGATACTGCTGAAGAAGCTGCTTTAGCTTATGATACTGCAGCTTTTAAGTTAAGGGGTGACATTGCTAAGCTTAATTTCCCTCATTTACATCACAATGGTGCTCATGTTTATGGTGAATTTGGAAAGTTTAAGCCTCTTCCTTCTTCAGTTGATGCAAAGCTCCAAGCTATTTGTGAAAACTTGGACACTAAAAGAATGCAACAAGGGAATATAGAGAAGCCATGTTCTAATGATGTGGATACAAAACCTAAGTTAGAAGATTATAAGGTTGATATTAATCAAATGTTATCACCTATGTCTGAAGAATCATCATCATCATGTATTGGTTCAGCTTCTTCACCTGAATCTGATATTACTTTCTTGGATTTCTCTGATTCTAATGAGAGTAATACATTTGGATTGGATTTGGGGAAGTACCCTTCGGTGGAGATTGATTGGGAAGCTATTTGA 918 0.3519 MAYNNNSNMTQDFLEPCSEELMKTLETYVKSESYSYNSSFSISNSTPNPSSHFSNLYPNTSSIKLNQLTPSQLLQIQSQIHIQQQQNQQHRLMQLQHTNQHSVSFLSPKNVPMKHIGTPNAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDTAAFKLRGDIAKLNFPHLHHNGAHVYGEFGKFKPLPSSVDAKLQAICENLDTKRMQQGNIEKPCSNDVDTKPKLEDYKVDINQMLSPMSEESSSSCIGSASSPESDITFLDFSDSNESNTFGLDLGKYPSVEIDWEAI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0070 305 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 6 305 - -
Lan15g0070 305 Gene3D AP2/ERF domain 126 184 IPR036955 GO:0003700|GO:0006355
Lan15g0070 305 SUPERFAMILY DNA-binding domain 126 184 IPR016177 GO:0003677
Lan15g0070 305 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Lan15g0070 305 CDD AP2 125 185 IPR001471 GO:0003700|GO:0006355
Lan15g0070 305 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Lan15g0070 305 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 6 305 - -
Lan15g0070 305 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Lan15g0070 305 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Lan15g0070 305 Pfam AP2 domain 127 175 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0070 Lan-Chr15 452528 453650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0070 49 305 AP2-EREBP Transcription Factor Family AT1G78080 51.812 8.05e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan15g0070 AP2 8.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0070 K09286 - gmx:100818839 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0070 15 452528 453650 Lan14g0184 14 2228927 2230141 LSH