Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0069 ATGACTCAGCAGCAGAATGTGGTAATGTCTGAAACCAAATCTGAAGTTGTGGCACAAAATAAGGCACAACAAGGAGGAGGGTACATTTCCATTTCTAGAAGGAGTATTTTGAAGAACCTTGAAATCAATGGAAGAGTTAATGGTTTGATTGAGTCCATGAAAGCTTCATCTCCAACCCATTCTTCTTTGTCTCAATACCAAACCTCTTGGATTGTTCATCATCCATCAGCATTAGACATGTTTGACCAAATTATGGAAGCATCAAAAGGAAAGCAAATAGTGATGTTTCTTGATTATGATGGTACACTCTCACCTATAGTGGAAGACCCTGACCGTGCTTACATGTCCAATTCGATGAGAAAAACAGTGAGGAAACTTGCAAGGTGTTTTCCAACAGCAATAGTAACTGGCAGATGCAAAGACAAGGTGTACAATTTTGTTCGCTTAGCAGAGTTATACTATGCAGGAAGCCATGGCTTAGATATTAAAGGGCCAACTAGAACCTCTAAGTACAACAAAGATAGGAAAGCAGAGACACTTATTTTTCAACCTGCTACTCAATTTCTTCCAATGATAGATCATGTATACCAACAACTTGTTGATAAGATGAAACCAATTCCTGGATCAATGGTGGAACATAACAAGTTCTGTGTCTCTATTCATTTTCGTTGTGTTGATGAAAAGAAATGGATTGAACTAGCACACCAAGTGAAATCAGTATTAAAGAACTACCCAAAGCTTCGTCTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCAATATTAAATGGGACAAGGGGAAAGCCTTAGAATTTTTATTAGAATCACTTGGATTGTCCAACTGTAATAATGTTTTCCCTATATATATTGGTGATGATCAAAGCGATGAAGATGCTTTCAAGAAATTAAGAGACAAAGGACAAGGTTTTGGGATTCTTGTCTCTAAATTTGCAAAGGAAACAAGTGCATCTTACACTTTACAAGAACCCAATGAGGTTATGGACTTTCTTCAACGTTTGGTAGAGTGGAAAAAAGTGTCACTGCGTGCACGTTCCAAAGTGTTAATGTGTACATGA 1077 0.3788 MTQQQNVVMSETKSEVVAQNKAQQGGGYISISRRSILKNLEINGRVNGLIESMKASSPTHSSLSQYQTSWIVHHPSALDMFDQIMEASKGKQIVMFLDYDGTLSPIVEDPDRAYMSNSMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGLDIKGPTRTSKYNKDRKAETLIFQPATQFLPMIDHVYQQLVDKMKPIPGSMVEHNKFCVSIHFRCVDEKKWIELAHQVKSVLKNYPKLRLTQGRKVLEIRPNIKWDKGKALEFLLESLGLSNCNNVFPIYIGDDQSDEDAFKKLRDKGQGFGILVSKFAKETSASYTLQEPNEVMDFLQRLVEWKKVSLRARSKVLMCT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0069 358 Gene3D - 93 183 IPR023214 -
Lan15g0069 358 Gene3D - 196 353 IPR023214 -
Lan15g0069 358 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 1 350 - -
Lan15g0069 358 SUPERFAMILY HAD-like 94 344 IPR036412 -
Lan15g0069 358 CDD HAD_TPP 94 334 - -
Lan15g0069 358 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 350 IPR044651 GO:0004805|GO:0005992
Lan15g0069 358 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 95 305 IPR006379 -
Lan15g0069 358 Pfam Trehalose-phosphatase 96 330 IPR003337 GO:0003824|GO:0005992
Lan15g0069 358 TIGRFAM T6PP: trehalose-phosphatase 91 341 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0069 Lan-Chr15 438638 442446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0069 89 340 Trehalose Biosynthesis Gene Families AT1G70290 26.394 2.72e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0069 K01087 - gmx:100794430 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0069 15 438638 442446 Lan14g0185 14 2244411 2254698 LSH
Lan15g0069 15 438638 442446 Lan3g0999 3 21754442 21771919 LSH