Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0066 ATGACATTCAAGCGTAGGAATGGTGGACGTAACAAGCATGGCCGTGGCCATGTCAAGTTCATTCGTTGCTCTAACTGTGGTAAATGCTGCCCAAAGGATAAGTCGATTAAGCGATTTGTGGTGAGAAACATTGTTGAGCAGGCTGCAGTTAGAGATGTGCAGGAGGCTTGTGTCTATGAACAATACGCTCTTCCGAAGCTGTATGTGAAGTTGCATTACTGTGTTTCCTGTGCTATTCACTCTCATGTTGTGAGGGTTCGTTCCCGCACTGATAGGAGGAAGCGTGACCCCCCACAGCGCTTCATCAGGCGCAGGGAGGATGCACCAAGGCCTGGTCAGCCAGGTCAGGCACCTCGTCCTGCTGGAGCAGCTGCTCCTCCCCGTGCCTAA 390 0.5205 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFVVRNIVEQAAVRDVQEACVYEQYALPKLYVKLHYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRREDAPRPGQPGQAPRPAGAAAPPRA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0066 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 128 - -
Lan15g0066 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 128 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan15g0066 129 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Lan15g0066 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan15g0066 129 MobiDBLite consensus disorder prediction 90 110 - -
Lan15g0066 129 MobiDBLite consensus disorder prediction 85 129 - -
Lan15g0066 129 MobiDBLite consensus disorder prediction 113 129 - -
Lan15g0066 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0066 Lan-Chr15 417897 419954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0066 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 82.759 2.75e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0066 K02976 - gmx:100781822 204.912