Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0059 ATGGCTATTACACCTTTTGGTATCACATTTTCTACTCAATGGGGAATTCATCCTCACATTTTTGCCAAATCCAGTATCATGGGTAGGGTTGCAGCATCAAGTTCCACCCTAAATGTTACGAGCAGGATGAGCTTTATGGCTGCACCGAGTTCAAGTTTTTTATCAGGGGATTCCTTGCGTGCACTATACAATATGGGTTCATCTCGGACTTTGAATCATCGTAGGGGGTCGAGGTTGATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTTGGAGTGTCAAAAAATTCTAGCAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGAACCTGGTGCAGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAAAAGCGATCTATATATGACACATACGGAGAGGCTGGGCTTAAAGGTTCAGCAGGAATGGGTGGCATGGGGGATTTCAACAATCCTTTTGACCTGTTTGAGACATTGTTCGAGGGCATGAATGGTGGTGGGAGGAGCTCCAGAGGTTCTAGGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTAGTTTTAAACTTCAAAGAAGCCGTTTTTGGAGTAGAGAAGGAGATAGAGATTAGGCGATTGGAGAGCTGTGGAACTTGCAATGGTACAGGGGCTAAACCCGGGACTAAGTCATCCAGATGTAGCACTTGTGCAGGTCAAGGTCGTGTTGTCTCACAAACAAGGACTCCACTGGGTATCTTCCAGCAGACTATGACCTGCTCTTCCTGCAACGGGACTGGAGAAACTTCCACGCCTTGCAATATATGTTCCGGGGATGGTCGAGTCAGGAGAACAAAGCGGATAAGTCTCAAGGTTCCAGCTGGAGTGGACTCTGGTAGCCGATTAAGGGTCCGTAATGAAGGAAATACTGGAAGGCGTGGAGGTTCTCCTGGCGATCTCTTTGTTATCCTCGAAGTTATCCCAGACCCTGTCCTTAAACGTGATGACACCAACATTTTATCCACCTCTAAGGTCTCTTATATTGATGCAATCTTGGGGACTACGATTAAGGTTCCTACTGTAGATGGCATGGTCGACTTAAAAATCCCAGCTGGGACTCAACCAGGCTCAACACTTGTTATGGCTAGGAAAGGTGTTCCCCGACTGAATAAAAGCAACATGCGGGGTGACCAATTGGTTCGTGTGCAAGTTGAAATCCCGAAAAGATTGAGCAGCGACGAGAGAAAACTTATCGAAGAACTTGCTGACTTAAGCAAAGGCAAGACTGCCACAAGTAGATGA 1332 0.4535 MAITPFGITFSTQWGIHPHIFAKSSIMGRVAASSSTLNVTSRMSFMAAPSSSFLSGDSLRALYNMGSSRTLNHRRGSRLIVRADADYYSVLGVSKNSSKSEIKSAYRKLARNYHPDVNKEPGAEQKFKDISNAYEVLSDDEKRSIYDTYGEAGLKGSAGMGGMGDFNNPFDLFETLFEGMNGGGRSSRGSRNGAVEGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCGTCNGTGAKPGTKSSRCSTCAGQGRVVSQTRTPLGIFQQTMTCSSCNGTGETSTPCNICSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNTGRRGGSPGDLFVILEVIPDPVLKRDDTNILSTSKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPGSTLVMARKGVPRLNKSNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKTATSR* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0059 443 Pfam DnaJ C terminal domain 202 417 IPR002939 -
Lan15g0059 443 Gene3D - 337 443 - -
Lan15g0059 443 SMART dnaj_3 85 142 IPR001623 -
Lan15g0059 443 Pfam DnaJ central domain 227 290 IPR001305 GO:0031072|GO:0051082
Lan15g0059 443 PANTHER BNAA01G34580D PROTEIN 34 443 - -
Lan15g0059 443 PRINTS DnaJ domain signature 88 106 IPR001623 -
Lan15g0059 443 PRINTS DnaJ domain signature 106 121 IPR001623 -
Lan15g0059 443 PRINTS DnaJ domain signature 122 142 IPR001623 -
Lan15g0059 443 PRINTS DnaJ domain signature 142 161 IPR001623 -
Lan15g0059 443 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Lan15g0059 443 SUPERFAMILY Chaperone J-domain 83 184 IPR036869 -
Lan15g0059 443 SUPERFAMILY HSP40/DnaJ peptide-binding domain 195 350 IPR008971 GO:0006457|GO:0051082
Lan15g0059 443 CDD DnaJ_zf 227 290 IPR001305 GO:0031072|GO:0051082
Lan15g0059 443 Gene3D - 227 290 - -
Lan15g0059 443 Pfam DnaJ domain 86 147 IPR001623 -
Lan15g0059 443 Gene3D - 197 332 - -
Lan15g0059 443 TIGRFAM DnaJ_bact: chaperone protein DnaJ 86 433 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan15g0059 443 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 214 293 IPR036410 -
Lan15g0059 443 CDD DnaJ 86 139 IPR001623 -
Lan15g0059 443 Gene3D DnaJ domain 83 190 IPR036869 -
Lan15g0059 443 ProSiteProfiles Zinc finger CR-type profile. 214 295 IPR001305 GO:0031072|GO:0051082
Lan15g0059 443 ProSiteProfiles dnaJ domain profile. 86 150 IPR001623 -
Lan15g0059 443 SUPERFAMILY HSP40/DnaJ peptide-binding domain 342 428 IPR008971 GO:0006457|GO:0051082
Lan15g0059 443 Hamap Chaperone protein DnaJ [dnaJ]. 83 440 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan15g0059 443 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 34 443 - -
Lan15g0059 443 CDD DnaJ_C 198 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0059 Lan-Chr15 374877 379193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0059 87 149 C2H2 Transcription Factor Family AT1G74250 44.928 6.00e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0059 K03686 - gmx:100786143 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0059 15 374877 379193 Lan14g0198 14 2376227 2380646 LSH