Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0048 ATGGACTACGCTACAGAATTTCCTCACTCTTCAATGGATCGCCGTCCTCGTAAAAAACCTAAATTGGCTTGGGATCTCCATCAATCCAACTCAAAGGCTCATTCGGGAATTTATTACGGACAAGAGGTTGCAAATGTGACAAGCTTTGAAACGCCGAGGGTGCTTCCTGAACATGCTGGTCTTTTTGTTAAAGGATTGGCTGAAAAAGGTTCTCCCCAATGGCGAGATGATGATAAAGATGGGCATTATGTGTTTGCACTCGGAGACAATTTAACTTCTCGATATAAGATCCTCAGGAAAATTGGTGAAGGGACTTTTGGTCAGGTTTTGGAATGTTGGGATAGAGAAACGAGGGAGCTGGTTGCCATTAAAGTTGTGCGGAGTATTAAGAAATACCGTGAAGCAGCTATGGTAGAAGTTGATGTGCTCCATTTGCTTGGGAGGTATGACAGGAATGGCAGCCGCTGTGTTCAAATACGGAACTGGTTTGACTACCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTTCGGAAGAACAATTATGGACCATTTCCGGTTGATCTTGTCCGTGAGCTAGGCAGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGCGCCTCATCCACACAGACTTGAAGCCCGAAAATATACTTTTTATTTCCTCAGAATATGTAAAAGTGCCCGACTACAAGGTTACATTCCGGTCTCCAAAAGAGGGAACCTCTTTTAAGAGACTGCCAAAGTCAAGTGCTATCAAGGTTATTGATTTTGGTAGCACAGCCTATGAGCACCAAGATCACAACTATATTGTCTCTACTAGGCATTATCGAGCACCTGAGGTTATTCTTGGACTAGGGTGGAACTTTCCTTGTGACATATGGAGTGTTGGCTGCATTTTAATTGAGTTGTGCTCGGGAGAAGCTTTGTTTCAGACACATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTTTTAGGCCCGTTACCTCAGCACATGTTGAAAAGAGCAGACCGGCAGGCAGAGAAGTATGTCCGAAGGGGTAGACTGAACTGGCCGGAAGGAGCAATCTCTCGAGAGAGTATCAAGGCTGTATTGAAACTACCACGTCTTCCTAATCTGGTGATGCAGCATGTGGATCACTCTGCCGGGGATCTCCTCGATCTCTTGCAGGGTCTACTTCGGTTTGACCCATCCAGTAGACTTAAAGCTCATGAAGCACTCAGGCATCCCTTCTTCACTGGGGAGCGTTACCAGAGATTAAGATAG 1296 0.446 MDYATEFPHSSMDRRPRKKPKLAWDLHQSNSKAHSGIYYGQEVANVTSFETPRVLPEHAGLFVKGLAEKGSPQWRDDDKDGHYVFALGDNLTSRYKILRKIGEGTFGQVLECWDRETRELVAIKVVRSIKKYREAAMVEVDVLHLLGRYDRNGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYGPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFISSEYVKVPDYKVTFRSPKEGTSFKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWNFPCDIWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRQAEKYVRRGRLNWPEGAISRESIKAVLKLPRLPNLVMQHVDHSAGDLLDLLQGLLRFDPSSRLKAHEALRHPFFTGERYQRLR* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0048 431 SUPERFAMILY Protein kinase-like (PK-like) 82 427 IPR011009 -
Lan15g0048 431 ProSiteProfiles Protein kinase domain profile. 95 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0048 431 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Lan15g0048 431 Gene3D Transferase(Phosphotransferase) domain 1 149 422 - -
Lan15g0048 431 MobiDBLite consensus disorder prediction 1 20 - -
Lan15g0048 431 CDD PKc_CLK 82 422 - -
Lan15g0048 431 PANTHER KINASE AFC1 1 429 - -
Lan15g0048 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lan15g0048 431 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 429 - -
Lan15g0048 431 SMART serkin_6 95 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0048 431 Pfam Protein kinase domain 95 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0048 431 ProSitePatterns Protein kinases ATP-binding region signature. 101 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0048 Lan-Chr15 304029 307986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0048 95 422 Core Cell Cycle Gene Families AT1G76540 25.959 4.95e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lan15g0048 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0048 K08287 - qsu:112037155 769.229