Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0041 ATGGAATGCTGCATATTCTCTAAGCTAAAAACCCAACCTTTATGGTTCCTCATCCTCTTCTCCCTCGGTTTCATCACCCTCCTCCGATTCTCTCTCATTTTCCTCAAATGGGTCTTCGTCAATTTCCTCAGACCTTCCAAAAACCTCAAAAAGTATGGATCTTGGGCCCTCATCACCGGCCCCACCGACGGCATCGGCAAAGGTTTCGCCTTTCAGCTCGCCGGAAAAGGACTCAACCTTGTCCTCGTTGGTCGCAGTCCCGACAAGCTCAAAGCGGTTTCTGATTCAATCGCCGCCAAGTTCGGGAAAATTAAGGTTGTCACAGTAGTTGTCGATTTTGCAACCAGTGATCTAGATTCTGGTATGGAGAAGATTAGAGAAGCGATTGAGGGTCTTGATGTTGGGGTTTTGGTGAACAATGTTGGGATTTCTTACCCTTATGCTAGATTCTTCCATGAGGTTGATGAAGAGCTTTTCAGGAATTTGATTAAGGTCAATATTGAAGGGACTACTAAGGTTACTCAACTTGTGTTGAATGGTATGCTTAAGAGGAAGAAAGGTGCTATTGTTAATATTGGTTCTGGTGCTGCTATTGTTATTCCTTCTGATCCACTTTATGCTGTTTATGCTGCATCTAAAGCGTACATCGATCAATTTTCGAGATCTCTCTATGTGGAATACAAGAAGAGTGGGATTGACGTGCAGTGTCAGGTTCCATTATATGTAGCAACAAAGATGGCATCAATAAAGAGATCATCATTCTTTGTTCCATCAACAGATGGATATGCCAAAGCCGGTGTGAGATGGATAGGCTATGAACCTCGTTGCACACCGTACTGGCCCCATACCCTTCTCTGGGCCTTGGCATACTCATTGCCAGAGTCTGTCGTTGATGCTTGGCGCCTACGGTTTTGCCTCGGTATTCGAAAGAGGGGGCAGCTCAAGGACTCAAAGAAAAAGGAATGA 966 0.4493 MECCIFSKLKTQPLWFLILFSLGFITLLRFSLIFLKWVFVNFLRPSKNLKKYGSWALITGPTDGIGKGFAFQLAGKGLNLVLVGRSPDKLKAVSDSIAAKFGKIKVVTVVVDFATSDLDSGMEKIREAIEGLDVGVLVNNVGISYPYARFFHEVDEELFRNLIKVNIEGTTKVTQLVLNGMLKRKKGAIVNIGSGAAIVIPSDPLYAVYAASKAYIDQFSRSLYVEYKKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDGYAKAGVRWIGYEPRCTPYWPHTLLWALAYSLPESVVDAWRLRFCLGIRKRGQLKDSKKKE* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0041 321 CDD 17beta-HSD1_like_SDR_c 53 296 - -
Lan15g0041 321 PIRSF 11-beta-HSD1 5 315 - -
Lan15g0041 321 Gene3D - 48 267 - -
Lan15g0041 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 143 IPR002347 -
Lan15g0041 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 195 IPR002347 -
Lan15g0041 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 209 228 IPR002347 -
Lan15g0041 321 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Lan15g0041 321 PRINTS Glucose/ribitol dehydrogenase family signature 132 143 IPR002347 -
Lan15g0041 321 PRINTS Glucose/ribitol dehydrogenase family signature 181 197 IPR002347 -
Lan15g0041 321 PRINTS Glucose/ribitol dehydrogenase family signature 209 228 IPR002347 -
Lan15g0041 321 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Lan15g0041 321 Pfam short chain dehydrogenase 55 248 IPR002347 -
Lan15g0041 321 PANTHER BETA-KETOACYL REDUCTASE 1-RELATED 5 320 - -
Lan15g0041 321 PANTHER RH59310P 5 320 - -
Lan15g0041 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 312 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0041 Lan-Chr15 256749 259240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0041 1 321 Lipid Metabolism Gene Families AT1G67730 63.863 2.24e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0041 K10251 - jre:108990665 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0041 15 256749 259240 Lan14g0215 14 2485848 2488307 LSH
Lan12g0567 12 12439344 12443692 Lan15g0041 15 256749 259240 PCT
Lan1g1792 1 32622835 32627955 Lan15g0041 15 256749 259240 PCT